RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 CHD1O14646 1710 aa6.28□□□□□ -1.4
UBE2N-202ENST00000548946 KNDC1Q76NI1 1749 aa6.28□□□□□ -1.4
UBE2N-202ENST00000548946 XDHP47989 1333 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 ATP10DQ9P241 1426 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 ABCC3O15438 1527 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 LRRC7Q96NW7 1537 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 SYCE3A1L190 88 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 TGM5O43548 720 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 NRP2O60462 931 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 XPAP23025 273 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-202ENST00000548946 PRKAR2BP31323 418 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 PHC1P78364 1004 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 PURAQ00577 322 aaKnown RBP6.27□□□□□ -1.41
UBE2N-202ENST00000548946 MB21D1Q8N884 522 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 C8orf58Q8NAV2 365 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 MDGA1Q8NFP4 955 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 ST8SIA2Q92186 375 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 CLIP3Q96DZ5 547 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 CHFRQ96EP1 664 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 MFSD3Q96ES6 412 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 PHACTR3Q96KR7 559 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 MNTQ99583 582 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 CCDC94Q9BW85 323 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-202ENST00000548946 TARS2Q9BW92 718 aaKnown RBP6.27□□□□□ -1.41
UBE2N-202ENST00000548946 TSPY26PQ9H489 355 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 SLC2A4RGQ9NR83 387 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 KCNG1Q9UIX4 513 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 USP18Q9UMW8 372 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 MRPL42Q9Y6G3 142 aaKnown RBP6.27□□□□□ -1.41
UBE2N-202ENST00000548946 PIK3C2BO00750 1634 aa6.27□□□□□ -1.41
UBE2N-202ENST00000548946 KIDINS220Q9ULH0 1771 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 NEXMIFQ5QGS0 1516 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 CAMSAP1Q5T5Y3 1602 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 ALDH1A2O94788 518 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 LSSP48449 732 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 GPR15P49685 360 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 RABGGTBP53611 331 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 INHBCP55103 352 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 IL2P60568 153 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 HMGN5P82970 282 aaKnown RBP6.26□□□□□ -1.41
UBE2N-202ENST00000548946 DMTNQ08495 405 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 CCDC178Q5BJE1 867 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 DALRD3Q5D0E6 543 aaKnown RBP6.26□□□□□ -1.41
UBE2N-202ENST00000548946 CEP85Q6P2H3 762 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 APBB1IPQ7Z5R6 666 aaPredicted RBP6.26□□□□□ -1.41
UBE2N-202ENST00000548946 RPAP2Q8IXW5 612 aaPredicted RBP6.26□□□□□ -1.41
UBE2N-202ENST00000548946 GAB3Q8WWW8 586 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 THUMPD2Q9BTF0 503 aaKnown RBP6.26□□□□□ -1.41
UBE2N-202ENST00000548946 EPC1Q9H2F5 836 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 SPTLC3Q9NUV7 552 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 ING3Q9NXR8 418 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 TERF2IPQ9NYB0 399 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 POLKQ9UBT6 870 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
UBE2N-202ENST00000548946 AK9Q5TCS8 1911 aa6.26□□□□□ -1.41
UBE2N-202ENST00000548946 RGS12O14924 1447 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 CPSF1Q10570 1443 aaKnown RBP6.25□□□□□ -1.41
UBE2N-202ENST00000548946 ERC2O15083 957 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 RAB11FIP3O75154 756 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 REC8O95072 547 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 FKBP9O95302 570 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 PFKMP08237 780 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 ZSCAN20P17040 1043 aaPredicted RBP6.25□□□□□ -1.41
UBE2N-202ENST00000548946 PTGS2P35354 604 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 MCM2P49736 904 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 NRG3P56975 720 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 SLC25A3Q00325 362 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 CD69Q07108 199 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 TOB2Q14106 344 aaPredicted RBP6.25□□□□□ -1.41
UBE2N-202ENST00000548946 TWISTNBQ3B726 338 aaPredicted RBP6.25□□□□□ -1.41
UBE2N-202ENST00000548946 ZBTB41Q5SVQ8 909 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 FRMD7Q6ZUT3 714 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 HTR3DQ70Z44 454 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 FKBP9P1Q75LS8 142 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 PIK3C3Q8NEB9 887 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 OR5M3Q8NGP4 307 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 PIBF1Q8WXW3 757 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 TMX3Q96JJ7 454 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 CEP89Q96ST8 783 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 WNT8AQ9H1J5 351 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 RTL1A6NKG5 1358 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 PTPRMP28827 1452 aa6.25□□□□□ -1.41
UBE2N-202ENST00000548946 CLTCQ00610 1675 aaKnown RBP6.25□□□□□ -1.41
UBE2N-202ENST00000548946 FRMPD1Q5SYB0 1578 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 KLRG2A4D1S0 409 aaPredicted RBP6.24□□□□□ -1.41
UBE2N-202ENST00000548946 LY86O95711 162 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 TERF2Q15554 542 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 SEPT7Q16181 437 aaKnown RBP6.24□□□□□ -1.41
UBE2N-202ENST00000548946 DCAF17Q5H9S7 520 aaPredicted RBP6.24□□□□□ -1.41
UBE2N-202ENST00000548946 RABL3Q5HYI8 236 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 CRB2Q5IJ48 1285 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 KRTAP5-3Q6L8H2 238 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 LMBR1LQ6UX01 489 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 HDGFL2Q7Z4V5 671 aaPredicted RBP6.24□□□□□ -1.41
UBE2N-202ENST00000548946 RSAD2Q8WXG1 361 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 LARP4BQ92615 738 aaKnown RBP6.24□□□□□ -1.41
UBE2N-202ENST00000548946 HAS1Q92839 578 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 PGBD4Q96DM1 585 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 PRRX2Q99811 253 aa6.24□□□□□ -1.41
UBE2N-202ENST00000548946 NRDE2Q9H7Z3 1164 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms