RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 GGT7Q9UJ14 662 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ANAPC7Q9UJX3 599 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ANAPC5Q9UJX4 755 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 NEU2Q9Y3R4 380 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 ZHX2Q9Y6X8 837 aa10.54□□□□□ -0.72
SMARCD1-205ENST00000548573 SMCHD1A6NHR9 2005 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 KRT16P08779 473 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 RPSAP08865 295 aaKnown RBP10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 MYBL1P10243 752 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 ECE1P42892 770 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 MSH2P43246 934 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 TNIP1Q15025 636 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 ENOSF1Q7L5Y1 443 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 NIPA1Q7RTP0 329 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 PARD3BQ8TEW8 1205 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 EURLQ9NYK6 297 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 NKIRAS1Q9NYS0 192 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 HERC5Q9UII4 1024 aaKnown RBP10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 EXOC7Q9UPT5 735 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 L3MBTL1Q9Y468 752 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 DDX39AO00148 427 aaKnown RBP10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 WFS1O76024 890 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 GH1P01241 217 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 ABHD2P08910 425 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 UNGP13051 313 aaPredicted RBP10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 ITGB5P18084 799 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 SCP2P22307 547 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 GTF2H1P32780 548 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 ADCY8P40145 1251 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 QARSP47897 775 aaKnown RBP10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 LMNB2Q03252 620 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 CCNG2Q16589 344 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 CGB2Q6NT52 195 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 USP37Q86T82 979 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 CYP4X1Q8N118 509 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 ANKRD35Q8N283 1001 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 CCDC89Q8N998 374 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 FBXL13Q8NEE6 735 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 GDAP1Q8TB36 358 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 TMC2Q8TDI7 906 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 TRIM11Q96F44 468 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 FOXP3Q9BZS1 431 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 RAB20Q9NX57 234 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 NAALADL1Q9UQQ1 740 aa10.53□□□□□ -0.72
SMARCD1-205ENST00000548573 ZNFX1Q9P2E3 1918 aaKnown RBP10.52□□□□□ -0.72
SMARCD1-205ENST00000548573 ZNF646O15015 1829 aaPredicted RBP10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 GOLGA8IPA6NC78 632 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 GOLGA8JA6NMD2 632 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 MAGEB2O15479 319 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 DHX15O43143 795 aaKnown RBP10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 UNC5CO95185 931 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 TAC1P20366 129 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 HSD17B4P51659 736 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 LACTBP83111 547 aaPredicted RBP10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 ATP11AP98196 1134 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 GCNT1Q02742 428 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 ENPEPQ07075 957 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 NR1H3Q13133 447 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 KLF1Q13351 362 aaPredicted RBP10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 SLC27A3Q5K4L6 730 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 FAM160B2Q86V87 743 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 ZNF677Q86XU0 584 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 CBWD2Q8IUF1 395 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 MCOLN2Q8IZK6 566 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 LARGE2Q8N3Y3 721 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 ATG4AQ8WYN0 398 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 DDX27Q96GQ7 796 aaKnown RBP10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 RMDN2Q96LZ7 410 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 CSRNP1Q96S65 589 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 MLXIPLQ9NP71 852 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 KCNH7Q9NS40 1196 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 USP21Q9UK80 565 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 PNMA3Q9UL41 463 aa10.52□□□□□ -0.73
SMARCD1-205ENST00000548573 SLC16A4O15374 487 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 ZC3H11AO75152 810 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 ATP5HO75947 161 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 CETPP11597 493 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 ADSSP30520 456 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 YWHABP31946 246 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 CCNG1P51959 295 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 SLC18A1P54219 525 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 PEX3P56589 373 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 IL9RQ01113 521 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 MGAT5Q09328 741 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 NAA25Q14CX7 972 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 ZKSCAN8Q15776 578 aaPredicted RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 ZNF365Q70YC5 407 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 MAP4K3Q8IVH8 894 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 SRRM1Q8IYB3 904 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 ACER1Q8TDN7 264 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 TAS1R2Q8TE23 839 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 FBF1Q8TES7 1133 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 CCDC127Q96BQ5 260 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 THOC1Q96FV9 657 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 MFSD14AQ96MC6 490 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 FBXL18Q96ME1 805 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 RAB3IPQ96QF0 476 aaPredicted RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 HERPUD2Q9BSE4 406 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 PITPNM3Q9BZ71 974 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms