RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 CYP11B2P19099 503 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 FGFR3P22607 806 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 NAMPTP43490 491 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 ELAVL2Q12926 359 aaKnown RBP13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 NT5DC1Q5TFE4 455 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 POTEHQ6S545 545 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 TPRG1Q6ZUI0 275 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 NPAS3Q8IXF0 933 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 SUMF1Q8NBK3 374 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 GTF3C6Q969F1 213 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 LTB4R2Q9NPC1 389 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 HEBP1Q9NRV9 189 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 NCDNQ9UBB6 729 aa13.16□□□□□ -0.3
TRAFD1-205ENST00000548277 GVINP1Q7Z2Y8 2422 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 KIF26AQ9ULI4 1882 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 RHOP08100 348 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 TARSP26639 723 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 ELF1P32519 619 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 PRKCQQ04759 706 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 GRM2Q14416 872 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 PUM1Q14671 1186 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 ECM1Q16610 540 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 RSPO4Q2I0M5 234 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 ATF7IP2Q5U623 682 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 TANGO2Q6ICL3 276 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 PDXDC1Q6P996 788 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 CD300LGQ6UXG3 332 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 CEP120Q8N960 986 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 C3orf58Q8NDZ4 430 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 ATRIPQ8WXE1 791 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 IFT74Q96LB3 600 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 CORO1BQ9BR76 489 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 POLR3CQ9BUI4 534 aaPredicted RBP13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 CCDC113Q9H0I3 377 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 MTRRQ9UBK8 725 aa13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 NDRG2Q9UN36 371 aaKnown RBP13.15□□□□□ -0.3
TRAFD1-205ENST00000548277 CCDC169A6NNP5 214 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 K7ERI5 159 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 PRRG1O14668 218 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 LRG1P02750 347 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 HARSP12081 509 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 CEBPBP17676 345 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 PTPN2P17706 415 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 RPA1P27694 616 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 HOXA9P31269 272 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 CCT6AP40227 531 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 NEK4P51957 841 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 ANAPC15P60006 121 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 PFKPQ01813 784 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 SOX4Q06945 474 aaPredicted RBP13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 UPP1Q16831 310 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 DCAF4L1Q3SXM0 396 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 VARS2Q5ST30 1063 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 TCEAL4Q96EI5 215 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 PPP1R10Q96QC0 940 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 DDX23Q9BUQ8 820 aaKnown RBP13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 BHMT2Q9H2M3 363 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 CYP4F11Q9HBI6 524 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 ZMYM2Q9UBW7 1377 aa13.14□□□□□ -0.31
TRAFD1-205ENST00000548277 OTOGLQ3ZCN5 2332 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 ZNF638Q14966 1978 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 SMIM28A0A1B0GU29 152 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 NRG2O14511 850 aaPredicted RBP13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 SEC24AO95486 1093 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 OR52Z1P0C646 297 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 YARSP54577 528 aaKnown RBP13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 PEX3P56589 373 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 NBR1Q14596 966 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 PPP2R5AQ15172 486 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 SAFBQ15424 915 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 LPAL2Q16609 132 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 ANKS3Q6ZW76 656 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 GPIHBP1Q8IV16 184 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 KIAA1024Q9UPX6 916 aa13.13□□□□□ -0.31
TRAFD1-205ENST00000548277 WDR27A2RRH5 827 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 GJA1P17302 382 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 ROR1Q01973 937 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 ST3GAL1Q11201 340 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 ZNF568Q3ZCX4 644 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 ZNF852Q6ZMS4 543 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 CCDC83Q8IWF9 413 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 TMEM130Q8N3G9 435 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 UROC1Q96N76 676 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 ZMAT2Q96NC0 199 aaKnown RBP13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 TCHPQ9BT92 498 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 CCDC94Q9BW85 323 aaPredicted RBP13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 BRD9Q9H8M2 597 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 FBXO4Q9UKT5 387 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
TRAFD1-205ENST00000548277 BACE2Q9Y5Z0 518 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms