RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 UBALD2Q8IYN6 164 aa7.37□□□□□ -1.23
SCAF11-211ENST00000547950 RNF168Q8IYW5 571 aaPredicted RBP7.37□□□□□ -1.23
SCAF11-211ENST00000547950 SMG7Q92540 1137 aaKnown RBP7.37□□□□□ -1.23
SCAF11-211ENST00000547950 ASIC4Q96FT7 647 aa7.37□□□□□ -1.23
SCAF11-211ENST00000547950 TCHPQ9BT92 498 aa7.37□□□□□ -1.23
SCAF11-211ENST00000547950 MMTAG2Q9BU76 263 aaKnown RBP7.37□□□□□ -1.23
SCAF11-211ENST00000547950 RUSC1Q9BVN2 902 aa7.37□□□□□ -1.23
SCAF11-211ENST00000547950 PIDD1Q9HB75 910 aa7.37□□□□□ -1.23
SCAF11-211ENST00000547950 KMT5AQ9NQR1 393 aa7.37□□□□□ -1.23
SCAF11-211ENST00000547950 SMC3Q9UQE7 1217 aa7.37□□□□□ -1.23
SCAF11-211ENST00000547950 USTQ9Y2C2 406 aa7.37□□□□□ -1.23
SCAF11-211ENST00000547950 MYH9P35579 1960 aaKnown RBP7.37□□□□□ -1.23
SCAF11-211ENST00000547950 PLXNA4Q9HCM2 1894 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 SF3B1O75533 1304 aaKnown RBP eCLIP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 NPHP3-ACAD11A0A0J9YXS1 232 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 SLC16A4O15374 487 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 B3GAT3O94766 335 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 CFHP08603 1231 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 HARSP12081 509 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 IGFBP6P24592 240 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 AVPR2P30518 371 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 GBP2P32456 591 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 PRPHP41219 470 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 YARSP54577 528 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 VCPP55072 806 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 NHLH1Q02575 133 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 DMP1Q13316 513 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 DHX8Q14562 1220 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 DCAF4L1Q3SXM0 396 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 RTP2Q5QGT7 225 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 LARP1BQ659C4 914 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 LILRA6Q6PI73 481 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 DCLRE1AQ6PJP8 1040 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 C15orf39Q6ZRI6 1047 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 C1orf186Q6ZWK4 172 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 DAW1Q8N136 415 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 CEP120Q8N960 986 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 LNX1Q8TBB1 728 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 CDK5RAP3Q96JB5 506 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 DRC1Q96MC2 740 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 PNMA5Q96PV4 448 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 ACO2Q99798 780 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 CLSTN3Q9BQT9 956 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 TTPALQ9BTX7 342 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 CCDC94Q9BW85 323 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 TARS2Q9BW92 718 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 MRPL4Q9BYD3 311 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 NT5C3AQ9H0P0 336 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 KCNH6Q9H252 994 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 PLEKHA4Q9H4M7 779 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 KCNK12Q9HB15 430 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 FNIP2Q9P278 1114 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 TNFSF13BQ9Y275 285 aa7.36□□□□□ -1.23
SCAF11-211ENST00000547950 RBM19Q9Y4C8 960 aaKnown RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-211ENST00000547950 LOXHD1Q8IVV2 1947 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 SMIM28A0A1B0GU29 152 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 I3L4J1 428 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ADAM12O43184 909 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 PLA2G4BP0C869 781 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 OR1D2P34982 312 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 MCM2P49736 904 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 MRE11P49959 708 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 CLCNKBP51801 687 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 SMTNP53814 917 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ATP2C1P98194 919 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-211ENST00000547950 CREMQ03060 361 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ELAVL2Q12926 359 aaKnown RBP7.35□□□□□ -1.23
SCAF11-211ENST00000547950 STRN3Q13033 797 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 MAPK7Q13164 816 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 TDGQ13569 410 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 NAB2Q15742 525 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 PSMD5Q16401 504 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ZNF568Q3ZCX4 644 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 CYP26C1Q6V0L0 522 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 TAS1R3Q7RTX0 852 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 SYT2Q8N9I0 419 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-211ENST00000547950 PRSS33Q8NF86 280 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 FLCNQ8NFG4 579 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ST13P5Q8NFI4 369 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-211ENST00000547950 CMASQ8NFW8 434 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-211ENST00000547950 HDAC7Q8WUI4 952 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 RSAD2Q8WXG1 361 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ZNF707Q96C28 371 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ZBTB45Q96K62 511 aaPredicted RBP7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ACAP3Q96P50 834 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 CDT1Q9H211 546 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 MFSD1Q9H3U5 465 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 C17orf75Q9HAS0 396 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 GOLGA2P5Q9HBQ8 144 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 PTPRHQ9HD43 1115 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 WDR6Q9NNW5 1121 aaKnown RBP7.35□□□□□ -1.23
SCAF11-211ENST00000547950 KCNG1Q9UIX4 513 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 FBXL21Q9UKT6 434 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 POLIQ9UNA4 740 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 KIAA1671Q9BY89 1806 aa7.35□□□□□ -1.23
SCAF11-211ENST00000547950 ZMYM2Q9UBW7 1377 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 NRG2O14511 850 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 TRAPPC3O43617 180 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms