RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 KCNK18Q7Z418 384 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 PLEKHH3Q7Z736 793 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 DPP9Q86TI2 863 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 SAPCD2Q86UD0 394 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 ZSCAN30Q86W11 494 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 FAM178BQ8IXR5 827 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 SMYD4Q8IYR2 804 aaPredicted RBP5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 CCDC112Q8NEF3 446 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 KIFAP3Q92845 792 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 GJA10Q969M2 543 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 HVCN1Q96D96 273 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 REEP2Q9BRK0 252 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 TMEM206Q9H813 350 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 MRPL44Q9H9J2 332 aaKnown RBP5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 C17orf75Q9HAS0 396 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 ATP6V0A4Q9HBG4 840 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 SLC39A2Q9NP94 309 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 ZNF302Q9NR11 478 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 FANCLQ9NW38 375 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 RGL1Q9NZL6 768 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 IFNKQ9P0W0 207 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 CGNQ9P2M7 1197 aaKnown RBP5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 KANSL3Q9P2N6 904 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 EXOC7Q9UPT5 735 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 ZNF236Q9UL36 1845 aa5.5□□□□□ -1.53
AC078880.2-201ENST00000547948 ITIH6Q6UXX5 1313 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SYNGAP1Q96PV0 1343 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 PASKQ96RG2 1323 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 PTPRFP10586 1907 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SLC15A5A6NIM6 579 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 DBX1A6NMT0 343 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 K7ENM7 598 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 N4BP3O15049 544 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CETN3O15182 167 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SLC16A3O15427 465 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CCP110O43303 1012 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SORBS3O60504 671 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 USO1O60763 962 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 TRPA1O75762 1119 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 FARP2O94887 1054 aaPredicted RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 GGPS1O95749 300 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 HOXC6P09630 235 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 RGS2P41220 211 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 MTIF2P46199 727 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 RARRES1P49788 294 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 ZNF131P52739 623 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 POLGP54098 1239 aaPredicted RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 STX17P56962 302 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SNRPFP62306 86 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 FKBP3Q00688 224 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 PRKCEQ02156 737 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CNTN2Q02246 1040 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SP4Q02446 784 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 STK4Q13043 487 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 NOGQ13253 232 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 GIT2Q14161 759 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 PPP2R5AQ15172 486 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 BMT2Q1RMZ1 405 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 EDRF1Q3B7T1 1238 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CCDC40Q4G0X9 1142 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 BRDTQ58F21 947 aaPredicted RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 XKR9Q5GH70 373 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 TCP11X2Q5H9J9 407 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 ODR4Q5SWX8 454 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CST9Q5W186 159 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SPECC1LQ69YQ0 1117 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CENPPQ6IPU0 288 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 RINT1Q6NUQ1 792 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 TTI2Q6NXR4 508 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SEPT14Q6ZU15 432 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 ARMCX2Q7L311 632 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 TMC6Q7Z403 805 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 GPR142Q7Z601 462 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 USP37Q86T82 979 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 PPFIBP1Q86W92 1011 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SFR1Q86XK3 245 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 DHX37Q8IY37 1157 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 FAM43AQ8N2R8 423 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 MYCT1Q8N699 235 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SPC24Q8NBT2 197 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 KIAA0895Q8NCT3 520 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SMG8Q8ND04 991 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 MORC4Q8TE76 937 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 AFAP1L1Q8TED9 768 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 PIGOQ8TEQ8 1089 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SREK1Q8WXA9 508 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 SEPT1Q8WYJ6 367 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 DNAJC19Q96DA6 116 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CEP170P1Q96L14 293 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 IFT74Q96LB3 600 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 CNOT6LQ96LI5 555 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 UIMC1Q96RL1 719 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 XPO4Q9C0E2 1151 aaKnown RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 LRRC4CQ9HCJ2 640 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 TXNRD2Q9NNW7 524 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 PAK6Q9NQU5 681 aaPredicted RBP5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 NRBP2Q9NSY0 501 aa5.49□□□□□ -1.53
AC078880.2-201ENST00000547948 TYW1Q9NV66 732 aaKnown RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms