RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 ELAC2Q9BQ52 826 aaKnown RBP5.27□□□□□ -1.57
SCAF11-210ENST00000547654 CYP4F11Q9HBI6 524 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 NMRK2Q9NPI5 230 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 MAN1C1Q9NR34 630 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 ADARB2Q9NS39 739 aaKnown RBP5.27□□□□□ -1.57
SCAF11-210ENST00000547654 MKS1Q9NXB0 559 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 EVLQ9UI08 416 aaPredicted RBP5.27□□□□□ -1.57
SCAF11-210ENST00000547654 PRSS50Q9UI38 385 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 ZBTB21Q9ULJ3 1066 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 FAM50BQ9Y247 325 aa5.27□□□□□ -1.57
SCAF11-210ENST00000547654 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-210ENST00000547654 TBX3O15119 743 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 TRIM24O15164 1050 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 XPOTO43592 962 aaKnown RBP5.26□□□□□ -1.57
SCAF11-210ENST00000547654 TCEA3O75764 348 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 SCAF4O95104 1147 aaKnown RBP5.26□□□□□ -1.57
SCAF11-210ENST00000547654 HK1P19367 917 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 NR4A1P22736 598 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 LSP1P33241 339 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 HTR3AP46098 478 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 GPR15P49685 360 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 PTTG1IPP53801 180 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 DDB1Q16531 1140 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 WDR78Q5VTH9 848 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 NAIF1Q69YI7 327 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-210ENST00000547654 TIGD7Q6NT04 549 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-210ENST00000547654 PGM2L1Q6PCE3 622 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 SYCE2Q6PIF2 218 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 ESPNLQ6ZVH7 1005 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 CMTM4Q8IZR5 234 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 MYRIPQ8NFW9 859 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 HSPBAP1Q96EW2 488 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 AIFM3Q96NN9 605 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 NUP88Q99567 741 aaPredicted RBP5.26□□□□□ -1.57
SCAF11-210ENST00000547654 NOL10Q9BSC4 688 aaKnown RBP5.26□□□□□ -1.57
SCAF11-210ENST00000547654 EPC1Q9H2F5 836 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 TOR3AQ9H497 397 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 PTPRHQ9HD43 1115 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 ING3Q9NXR8 418 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 SAP30BPQ9UHR5 308 aaKnown RBP5.26□□□□□ -1.57
SCAF11-210ENST00000547654 SYNPO2Q9UMS6 1093 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 PCDHB6Q9Y5E3 794 aa5.26□□□□□ -1.57
SCAF11-210ENST00000547654 WNT10BO00744 389 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 PCDH8O95206 1070 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 FGAP02671 866 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 HSPA6P17066 643 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 LAG3P18627 525 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 ZFP36P26651 326 aaKnown RBP5.25□□□□□ -1.57
SCAF11-210ENST00000547654 C21orf58P58505 322 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 KRT85P78386 507 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 LMOD3Q0VAK6 560 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 GRM3Q14832 879 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 PCBP2Q15366 365 aaKnown RBP eCLIP5.25□□□□□ -1.57
SCAF11-210ENST00000547654 CCDC178Q5BJE1 867 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 ZKSCAN2Q63HK3 967 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 FRMD7Q6ZUT3 714 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 EPM2AIP1Q7L775 607 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-210ENST00000547654 TAS1R1Q7RTX1 841 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 CDYL2Q8N8U2 506 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 BEND2Q8NDZ0 799 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 C1orf162Q8NEQ5 155 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-210ENST00000547654 VPS37AQ8NEZ2 397 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 TNIP3Q96KP6 325 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 STRBPQ96SI9 672 aaKnown RBP5.25□□□□□ -1.57
SCAF11-210ENST00000547654 WNT8AQ9H1J5 351 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 VTA1Q9NP79 307 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 TOPORSQ9NS56 1045 aaPredicted RBP5.25□□□□□ -1.57
SCAF11-210ENST00000547654 C14orf119Q9NWQ9 140 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 EIF2B4Q9UI10 523 aaKnown RBP5.25□□□□□ -1.57
SCAF11-210ENST00000547654 ANAPC4Q9UJX5 808 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 HS3ST4Q9Y661 456 aa5.25□□□□□ -1.57
SCAF11-210ENST00000547654 MAFGO15525 162 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 RBP3P10745 1247 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 LPOP22079 712 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-210ENST00000547654 CD38P28907 300 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 PPM1FP49593 454 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-210ENST00000547654 TMEM95Q3KNT9 176 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 INAVAQ3KP66 663 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 FAM83BQ5T0W9 1011 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 IFIT1BQ5T764 474 aaKnown RBP5.24□□□□□ -1.57
SCAF11-210ENST00000547654 EFCAB2Q5VUJ9 269 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 GPRIN1Q7Z2K8 1008 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 CMIPQ8IY22 773 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 CMTR2Q8IYT2 770 aaKnown RBP5.24□□□□□ -1.57
SCAF11-210ENST00000547654 ANKRD42Q8N9B4 389 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 FAXDC2Q96IV6 333 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 SENP7Q9BQF6 1050 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 C1orf112Q9NSG2 853 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 SCOCQ9UIL1 159 aa5.24□□□□□ -1.57
SCAF11-210ENST00000547654 FZD9O00144 591 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 APAF1O14727 1248 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 NRP1O14786 923 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 KIAA0355O15063 1070 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 PMM2O15305 246 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 FSBPO95073 299 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 TRAPPC10P48553 1259 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 USP14P54578 494 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 CLUL1Q15846 466 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 FAM214AQ32MH5 1076 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 ERAP2Q6P179 960 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms