RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 DDX23Q9BUQ8 820 aaKnown RBP10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 CCDC94Q9BW85 323 aaPredicted RBP10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 PDZD7Q9H5P4 517 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 BRD9Q9H8M2 597 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 MTRRQ9UBK8 725 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 GDAQ9Y2T3 454 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 BACE2Q9Y5Z0 518 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 STK24Q9Y6E0 443 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 CDY1Q9Y6F8 540 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 CEP250Q9BV73 2442 aa10.04□□□□□ -0.8
AC055716.3-201ENST00000547533 MUTP22033 750 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 FGFR3P22607 806 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 ADCY1Q08828 1119 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 NR5A1Q13285 461 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 ORC2Q13416 577 aaPredicted RBP10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 GNL2Q13823 731 aaKnown RBP10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 CYP4A22Q5TCH4 519 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 ATF7IP2Q5U623 682 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 RALGAPA1Q6GYQ0 2036 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 IQCEQ6IPM2 695 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 C1orf228Q6PIY5 440 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 PADI6Q6TGC4 694 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 NOSTRINQ8IVI9 506 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 NPAS3Q8IXF0 933 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 DIS3L2Q8IYB7 885 aaKnown RBP10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 SUMF1Q8NBK3 374 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 LEMD2Q8NC56 503 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 ITFG1Q8TB96 612 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 ING5Q8WYH8 240 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 KIFAP3Q92845 792 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 IRF7Q92985 503 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 ELSPBP1Q96BH3 223 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 PAAF1Q9BRP4 392 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 POLR3CQ9BUI4 534 aaPredicted RBP10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 RPP25Q9BUL9 199 aaKnown RBP10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 RAB34Q9BZG1 259 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 ZFP14Q9HCL3 533 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 GPRC5CQ9NQ84 441 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 DLL3Q9NYJ7 618 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 KCNG1Q9UIX4 513 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 SMG5Q9UPR3 1016 aaKnown RBP10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 NUB1Q9Y5A7 615 aa10.03□□□□□ -0.8
AC055716.3-201ENST00000547533 MED19A0JLT2 244 aaPredicted RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 POTEMA6NI47 508 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 K7ERI5 159 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 PTGESO14684 152 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 MICAL2O94851 1124 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 RHOP08100 348 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 GLULP15104 373 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 CYP11B2P19099 503 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 RPA1P27694 616 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 MCM7P33993 719 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 ANAPC15P60006 121 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 POTEGQ6S5H5 508 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 PDZD4Q76G19 769 aaPredicted RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 CATSPER3Q86XQ3 398 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 DCLK2Q8N568 766 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 ST13P5Q8NFI4 369 aaPredicted RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 ZNF461Q8TAF7 563 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 CLDN23Q96B33 292 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 MCRS1Q96EZ8 462 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 ZNF512Q96ME7 567 aaPredicted RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 RTKNQ9BST9 563 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 TRMT61BQ9BVS5 477 aaKnown RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 EPC1Q9H2F5 836 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 AVENQ9NQS1 362 aaPredicted RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 GJB4Q9NTQ9 266 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 DNMT3BQ9UBC3 853 aaKnown RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 CACNG4Q9UBN1 327 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 TPCN1Q9ULQ1 816 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 MAFFQ9ULX9 164 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 MYH11P35749 1972 aa10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 PDCD11Q14690 1871 aaKnown RBP10.02□□□□□ -0.81
AC055716.3-201ENST00000547533 DMXL1Q9Y485 3027 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 NOTCH4Q99466 2003 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 ARHGEF37A1IGU5 675 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 CCDC169A6NNP5 214 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 BTBD18B2RXH4 712 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 SYN3O14994 580 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 FOXD2O60548 495 aaPredicted RBP10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 LRRN2O75325 713 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 MARCKSP29966 332 aaPredicted RBP10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 RPL9P32969 192 aaKnown RBP10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 CCR3P51677 355 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 CLCNKBP51801 687 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 ARPP19P56211 112 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 UPP1Q16831 310 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 ZNF568Q3ZCX4 644 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 EARS2Q5JPH6 523 aaKnown RBP10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 TPGS2Q68CL5 300 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 YAF2Q8IY57 180 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 ZBTB44Q8NCP5 570 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 APPL2Q8NEU8 664 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 FAM200AQ8TCP9 573 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 CSGALNACT1Q8TDX6 532 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 E2F7Q96AV8 911 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 MSANTD3Q96H12 275 aa10.01□□□□□ -0.81
AC055716.3-201ENST00000547533 MTMR9Q96QG7 549 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms