RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 TUSC3Q13454 348 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 NAB2Q15742 525 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 GPR153Q6NV75 609 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 CSGALNACT2Q8N6G5 542 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 MKNK1Q9BUB5 465 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 AAASQ9NRG9 546 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 DERAQ9Y315 318 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 RWDD3Q9Y3V2 267 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 C2CD2Q9Y426 696 aa25.14■■□□□ 1.61
SMARCD1-203ENST00000547247 XPOTO43592 962 aaKnown RBP25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 LAG3P18627 525 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 WNT7BP56706 349 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 PSMD6Q15008 389 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 ZBTB6Q15916 424 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 NT5DC4Q86YG4 428 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 COLGALT2Q8IYK4 626 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 FAM186BQ8IYM0 893 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 CEP63Q96MT8 703 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 SAMD11Q96NU1 681 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 MED15Q96RN5 788 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 TGS1Q96RS0 853 aaKnown RBP25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 FNBP1Q96RU3 617 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 DNAJB4Q9UDY4 337 aa25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 UBQLN1Q9UMX0 589 aaKnown RBP25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.13■■□□□ 1.61
SMARCD1-203ENST00000547247 B4GALT3O60512 393 aa25.12■■□□□ 1.61
SMARCD1-203ENST00000547247 LINC00271P0C7V0 271 aa25.12■■□□□ 1.61
SMARCD1-203ENST00000547247 EPB41P11171 864 aaKnown RBP25.12■■□□□ 1.61
SMARCD1-203ENST00000547247 ALDH7A1P49419 539 aaKnown RBP25.12■■□□□ 1.61
SMARCD1-203ENST00000547247 TMEM132DQ14C87 1099 aa25.12■■□□□ 1.61
SMARCD1-203ENST00000547247 TMEM175Q9BSA9 504 aa25.12■■□□□ 1.61
SMARCD1-203ENST00000547247 ANK1P16157 1881 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 CARNS1A5YM72 827 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 FGFR1OPO95684 399 aaKnown RBP25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 ALDH2P05091 517 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 NFICP08651 508 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 BCAR1P56945 870 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 KCNT2Q6UVM3 1135 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 C11orf57Q6ZUT1 292 aaPredicted RBP25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 FILIP1Q7Z7B0 1213 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 COLGALT1Q8NBJ5 622 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 C18orf25Q96B23 403 aaPredicted RBP25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 CCDC127Q96BQ5 260 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 ZNF558Q96NG5 402 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 SRRTQ9BXP5 876 aaKnown RBP25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 DNAJC25Q9H1X3 360 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 PCDHB12Q9Y5F1 795 aa25.11■■□□□ 1.61
SMARCD1-203ENST00000547247 SLC16A3O15427 465 aaKnown RBP25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 GALTP07902 379 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 DLATP10515 647 aaKnown RBP25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 CYP3A5P20815 502 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 BMPR1AP36894 532 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 ERVK-21P61565 698 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 TPD52L1Q16890 204 aaPredicted RBP25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 ZNF697Q5TEC3 545 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 INTS8Q75QN2 995 aaKnown RBP25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 USP37Q86T82 979 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 EFCAB13Q8IY85 973 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 BEST2Q8NFU1 509 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 PARD3BQ8TEW8 1205 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 C17orf80Q9BSJ5 609 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 FUCA2Q9BTY2 467 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 PDCD11Q14690 1871 aaKnown RBP25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 CASTOR2A6NHX0 329 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 KRT13P13646 458 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 CTNNB1P35222 781 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 OR1G1P47890 313 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 SOX4Q06945 474 aaPredicted RBP25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 SPATA1Q5VX52 437 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 Q7L0L9 218 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 WDR49Q8IV35 697 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 TMC2Q8TDI7 906 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 CACTINQ8WUQ7 758 aaKnown RBP25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 UROC1Q96N76 676 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 GOLGA2P5Q9HBQ8 144 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 TUBGCP4Q9UGJ1 667 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 MTUS1Q9ULD2 1270 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 FAN1Q9Y2M0 1017 aa25.1■■□□□ 1.61
SMARCD1-203ENST00000547247 TMEM265A0A087WTH1 108 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 NRP1O14786 923 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 TNNI1P19237 187 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 PBX3P40426 434 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 SLC11A1P49279 550 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 TFAMQ00059 246 aaKnown RBP25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 ANO6Q4KMQ2 910 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 EPC2Q52LR7 807 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 SPRED2Q7Z698 418 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 CGRRF1Q99675 332 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 PLVAPQ9BX97 442 aa25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 NAT10Q9H0A0 1025 aaKnown RBP25.09■■□□□ 1.61
SMARCD1-203ENST00000547247 NT5C1B-RDH14C9J2C7 533 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 TMEM191BP0C7N4 346 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 VAMP7P51809 220 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 BFSP1Q12934 665 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 LMBRD2Q68DH5 695 aaPredicted RBP25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 ENOX1Q8TC92 643 aaKnown RBP25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 PLEKHO2Q8TD55 490 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 DDX27Q96GQ7 796 aaKnown RBP25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 BORCS6Q96GS4 357 aa25.08■■□□□ 1.61
SMARCD1-203ENST00000547247 ANKRD36BP1Q96IX9 119 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms