RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 OGTO15294 1046 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 C1RP00736 705 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 IDEP14735 1019 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 EPCAMP16422 314 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 CLCN4P51793 760 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 CLCNKBP51801 687 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 KRT85P78386 507 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 AMPD3Q01432 767 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 ITIH3Q06033 890 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 UPP1Q16831 310 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 SLC10A6Q3KNW5 377 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 ZC2HC1CQ53FD0 456 aaPredicted RBP17.34■□□□□ 0.37
DDX54-204ENST00000546898 RESP18Q5W5W9 173 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 C2orf16Q68DN1 1984 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 PDXDC1Q6P996 788 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 DCLRE1AQ6PJP8 1040 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 CCDC65Q8IXS2 484 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 HASPINQ8TF76 798 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 RABGGTAQ92696 567 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 DHX58Q96C10 678 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 ZMAT2Q96NC0 199 aaKnown RBP17.34■□□□□ 0.37
DDX54-204ENST00000546898 STRA6Q9BX79 667 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 S1PR5Q9H228 398 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 FNIP2Q9P278 1114 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 EXOC7Q9UPT5 735 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 ZDHHC9Q9Y397 364 aa17.34■□□□□ 0.37
DDX54-204ENST00000546898 A0A0B4J269 797 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 C19orf67A6NJJ6 358 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 TEX28O15482 410 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 MEFVO15553 781 aaPredicted RBP17.33■□□□□ 0.36
DDX54-204ENST00000546898 FAM189A1O60320 539 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 CXCL8P10145 99 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 SSTR3P32745 418 aaPredicted RBP17.33■□□□□ 0.36
DDX54-204ENST00000546898 PPP2R3AQ06190 1150 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 SOX4Q06945 474 aaPredicted RBP17.33■□□□□ 0.36
DDX54-204ENST00000546898 SEZ6Q53EL9 994 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 HERC4Q5GLZ8 1057 aaPredicted RBP17.33■□□□□ 0.36
DDX54-204ENST00000546898 SLFN12LQ6IEE8 588 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 CES5AQ6NT32 575 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 CNNM4Q6P4Q7 775 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 SLC39A4Q6P5W5 647 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 ELMSAN1Q6PJG2 1045 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.33■□□□□ 0.36
DDX54-204ENST00000546898 RIN2Q8WYP3 895 aaPredicted RBP17.33■□□□□ 0.36
DDX54-204ENST00000546898 PIK3R5Q8WYR1 880 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 FBXL18Q96ME1 805 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 TSPAN18Q96SJ8 248 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 TTPALQ9BTX7 342 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 MSTO1Q9BUK6 570 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 TRIM9Q9C026 710 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 SFXN1Q9H9B4 322 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 GOLGA2P5Q9HBQ8 144 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 PANK4Q9NVE7 773 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 DPP7Q9UHL4 492 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 PCDHB13Q9Y5F0 798 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 STYXL1Q9Y6J8 313 aa17.33■□□□□ 0.36
DDX54-204ENST00000546898 TTC26A0AVF1 554 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 PODXLO00592 558 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 TRAPPC3O43617 180 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 B3GAT3O94766 335 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 GCNT3O95395 438 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 RPL9P32969 192 aaKnown RBP17.32■□□□□ 0.36
DDX54-204ENST00000546898 CBX2Q14781 532 aaPredicted RBP17.32■□□□□ 0.36
DDX54-204ENST00000546898 RTP2Q5QGT7 225 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 L1TD1Q5T7N2 865 aaKnown RBP17.32■□□□□ 0.36
DDX54-204ENST00000546898 FAM171A1Q5VUB5 890 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 CD302Q8IX05 232 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 B3GALT6Q96L58 329 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 SPATA32Q96LK8 384 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 NECTIN4Q96NY8 510 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 ACCSQ96QU6 501 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 PHF7Q9BWX1 381 aaPredicted RBP17.32■□□□□ 0.36
DDX54-204ENST00000546898 ADAM7Q9H2U9 754 aa17.32■□□□□ 0.36
DDX54-204ENST00000546898 POLR2DO15514 142 aaKnown RBP17.31■□□□□ 0.36
DDX54-204ENST00000546898 XPOTO43592 962 aaKnown RBP17.31■□□□□ 0.36
DDX54-204ENST00000546898 GLUD1P00367 558 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 ADRB2P07550 413 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 CYP3A5P20815 502 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 TNFSF9P41273 254 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 MTHFRP42898 656 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 POU5F1Q01860 360 aaKnown RBP17.31■□□□□ 0.36
DDX54-204ENST00000546898 POSTNQ15063 836 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 STXBP4Q6ZWJ1 553 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 HDAC7Q8WUI4 952 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 LEO1Q8WVC0 666 aaPredicted RBP17.31■□□□□ 0.36
DDX54-204ENST00000546898 STAMQ92783 540 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 RIPOR3Q96MK2 946 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 RPF1Q9H9Y2 349 aaKnown RBP17.31■□□□□ 0.36
DDX54-204ENST00000546898 CD320Q9NPF0 282 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 TBC1D7Q9P0N9 293 aa17.31■□□□□ 0.36
DDX54-204ENST00000546898 CPSF3Q9UKF6 684 aaKnown RBP17.31■□□□□ 0.36
DDX54-204ENST00000546898 UBQLN1Q9UMX0 589 aaKnown RBP17.31■□□□□ 0.36
DDX54-204ENST00000546898 SPDYE4A6NLX3 237 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 ANKRD63C9JTQ0 380 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 FGFR3P22607 806 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 ENOX2Q16206 610 aaKnown RBP17.3■□□□□ 0.36
DDX54-204ENST00000546898 PSMD5Q16401 504 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 RARS2Q5T160 578 aaKnown RBP17.3■□□□□ 0.36
DDX54-204ENST00000546898 ADALQ6DHV7 355 aa17.3■□□□□ 0.36
DDX54-204ENST00000546898 CD300LGQ6UXG3 332 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms