RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 PARP2Q9UGN5 583 aa10.26□□□□□ -0.77
SSH1-205ENST00000546812 SDK1Q7Z5N4 2213 aa10.26□□□□□ -0.77
SSH1-205ENST00000546812 SETXQ7Z333 2677 aaKnown RBP10.25□□□□□ -0.77
SSH1-205ENST00000546812 NBEAQ8NFP9 2946 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 A0A1B0GUA9 196 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 ARHGEF37A1IGU5 675 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 TMEM8BA6NDV4 472 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 EML1O00423 815 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 NRG2O14511 850 aaPredicted RBP10.25□□□□□ -0.77
SSH1-205ENST00000546812 NPTXRO95502 500 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 TDP2O95551 362 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 FGFR3P22607 806 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 MBTD1Q05BQ5 628 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 TFDP1Q14186 410 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 LRRC32Q14392 662 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 EMC2Q15006 297 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 CCDC6Q16204 474 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 PRSS36Q5K4E3 855 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 SLC27A1Q6PCB7 646 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 C1orf228Q6PIY5 440 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 BLOC1S2Q6QNY1 142 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 LRSAM1Q6UWE0 723 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.25□□□□□ -0.77
SSH1-205ENST00000546812 WDR5BQ86VZ2 330 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 CCDC148Q8NFR7 591 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 TBCKQ8TEA7 893 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 DEPDC1BQ8WUY9 529 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 SMARCD2Q92925 531 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 COL26A1Q96A83 441 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 C22orf23Q9BZE7 217 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 UPF2Q9HAU5 1272 aaKnown RBP10.25□□□□□ -0.77
SSH1-205ENST00000546812 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
SSH1-205ENST00000546812 WRAP73Q9P2S5 460 aaPredicted RBP10.25□□□□□ -0.77
SSH1-205ENST00000546812 MTRRQ9UBK8 725 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 BACE2Q9Y5Z0 518 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 CDY1Q9Y6F8 540 aa10.25□□□□□ -0.77
SSH1-205ENST00000546812 FLNBO75369 2602 aaKnown RBP10.24□□□□□ -0.77
SSH1-205ENST00000546812 WDFY3Q8IZQ1 3526 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 WDR27A2RRH5 827 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 ARNTLO00327 626 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 ZNF197O14709 1029 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 ZNF263O14978 683 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 B4GALT5O43286 388 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 EPN2O95208 641 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 P4HBP07237 508 aaKnown RBP10.24□□□□□ -0.77
SSH1-205ENST00000546812 RPS6KB1P23443 525 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 YWHABP31946 246 aaKnown RBP10.24□□□□□ -0.77
SSH1-205ENST00000546812 RAP1GAPP47736 663 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 ANAPC15P60006 121 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 PLA2G2CQ5R387 149 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 PSAPL1Q6NUJ1 521 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 VITQ6UXI7 678 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 OTUD6AQ7L8S5 288 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 C4orf19Q8IY42 314 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 TCEAL4Q96EI5 215 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 MSANTD3Q96H12 275 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 MTRQ99707 1265 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 CORO1BQ9BR76 489 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 TMEM121BQ9BXQ6 578 aaPredicted RBP10.24□□□□□ -0.77
SSH1-205ENST00000546812 RBM12Q9NTZ6 932 aaKnown RBP10.24□□□□□ -0.77
SSH1-205ENST00000546812 NAP1L2Q9ULW6 460 aaPredicted RBP10.24□□□□□ -0.77
SSH1-205ENST00000546812 WASF3Q9UPY6 502 aa10.24□□□□□ -0.77
SSH1-205ENST00000546812 NOTCH4Q99466 2003 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 SRRM3A6NNA2 597 aaPredicted RBP10.23□□□□□ -0.77
SSH1-205ENST00000546812 PTGESO14684 152 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 LRG1P02750 347 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 THP07101 528 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 HMGB1P09429 215 aaKnown RBP10.23□□□□□ -0.77
SSH1-205ENST00000546812 PSMA5P28066 241 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 VIPR2P41587 438 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 AKAP17AQ02040 695 aaKnown RBP10.23□□□□□ -0.77
SSH1-205ENST00000546812 NAB2Q15742 525 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 XKR9Q5GH70 373 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 DGKKQ5KSL6 1271 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 RNF43Q68DV7 783 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 MOXD1Q6UVY6 613 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 Q6ZS52 159 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 CACNA2D4Q7Z3S7 1137 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 CDR2LQ86X02 465 aaPredicted RBP10.23□□□□□ -0.77
SSH1-205ENST00000546812 MFSD6LQ8IWD5 586 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 ZNF461Q8TAF7 563 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 GAB3Q8WWW8 586 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 ZSWIM3Q96MP5 696 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 NFKBIZQ9BYH8 718 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 TRPV4Q9HBA0 871 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 XPNPEP1Q9NQW7 623 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 C2orf42Q9NWW7 574 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 VPS54Q9P1Q0 977 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 VAV3Q9UKW4 847 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 PCDHGA5Q9Y5G8 931 aa10.23□□□□□ -0.77
SSH1-205ENST00000546812 PRRG1O14668 218 aa10.22□□□□□ -0.77
SSH1-205ENST00000546812 ZBTB39O15060 712 aa10.22□□□□□ -0.77
SSH1-205ENST00000546812 RPP40O75818 363 aaKnown RBP10.22□□□□□ -0.77
SSH1-205ENST00000546812 ABLIM3O94929 683 aa10.22□□□□□ -0.77
SSH1-205ENST00000546812 HOXC13P31276 330 aa10.22□□□□□ -0.77
SSH1-205ENST00000546812 ELF1P32519 619 aa10.22□□□□□ -0.77
SSH1-205ENST00000546812 CCR2P41597 374 aa10.22□□□□□ -0.77
SSH1-205ENST00000546812 RBM25P49756 843 aaKnown RBP10.22□□□□□ -0.77
SSH1-205ENST00000546812 NOVA1P51513 510 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms