RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 CRELD2Q6UXH1 353 aaPredicted RBP18.28■□□□□ 0.52
LTBR-215ENST00000546296 DDX53Q86TM3 631 aaKnown RBP18.28■□□□□ 0.52
LTBR-215ENST00000546296 VPS52Q8N1B4 723 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 GPD1LQ8N335 351 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 ZSWIM2Q8NEG5 633 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 DDX27Q96GQ7 796 aaKnown RBP18.28■□□□□ 0.52
LTBR-215ENST00000546296 TSPAN18Q96SJ8 248 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 KIAA1586Q9HCI6 787 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 RBAKQ9NYW8 714 aaPredicted RBP18.28■□□□□ 0.52
LTBR-215ENST00000546296 STK39Q9UEW8 545 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 RALGAPA2Q2PPJ7 1873 aa18.28■□□□□ 0.52
LTBR-215ENST00000546296 ZNF233A6NK53 670 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 CALUO43852 315 aaPredicted RBP18.27■□□□□ 0.52
LTBR-215ENST00000546296 CLCNKBP51801 687 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 ERVFC1P60507 584 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 CAMK1Q14012 370 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 ZNF658Q5TYW1 1059 aaPredicted RBP18.27■□□□□ 0.52
LTBR-215ENST00000546296 ISM2Q6H9L7 571 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 JADE1Q6IE81 842 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 PDE12Q6L8Q7 609 aaKnown RBP18.27■□□□□ 0.52
LTBR-215ENST00000546296 DCLRE1AQ6PJP8 1040 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 SMYD4Q8IYR2 804 aaPredicted RBP18.27■□□□□ 0.52
LTBR-215ENST00000546296 GUF1Q8N442 669 aaKnown RBP18.27■□□□□ 0.52
LTBR-215ENST00000546296 XXYLT1Q8NBI6 393 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 RDH13Q8NBN7 331 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 SPATA20Q8TB22 786 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 TCF25Q9BQ70 676 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 PAAF1Q9BRP4 392 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 NSUN3Q9H649 340 aaKnown RBP18.27■□□□□ 0.52
LTBR-215ENST00000546296 ASB7Q9H672 318 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 GOLGA2P5Q9HBQ8 144 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 MARCH5Q9NX47 278 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 ADAM28Q9UKQ2 775 aa18.27■□□□□ 0.52
LTBR-215ENST00000546296 UBQLN1Q9UMX0 589 aaKnown RBP18.27■□□□□ 0.52
LTBR-215ENST00000546296 NLRC5Q86WI3 1866 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 F8W810 466 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 PDXKO00764 312 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 EXOC3O60645 756 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 B3GAT3O94766 335 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 CXCL14O95715 111 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 ADRB2P07550 413 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 RPL9P32969 192 aaKnown RBP18.26■□□□□ 0.51
LTBR-215ENST00000546296 IRS1P35568 1242 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 SOX4Q06945 474 aaPredicted RBP18.26■□□□□ 0.51
LTBR-215ENST00000546296 TMEM132DQ14C87 1099 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 SKIV2LQ15477 1246 aaKnown RBP18.26■□□□□ 0.51
LTBR-215ENST00000546296 PLPP4Q5VZY2 271 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 BEST2Q8NFU1 509 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 HASPINQ8TF76 798 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 PPP2R3CQ969Q6 453 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 KCTD10Q9H3F6 313 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 NGRNQ9NPE2 291 aaKnown RBP18.26■□□□□ 0.51
LTBR-215ENST00000546296 TUBGCP4Q9UGJ1 667 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 MAN1B1Q9UKM7 699 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 DERAQ9Y315 318 aa18.26■□□□□ 0.51
LTBR-215ENST00000546296 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.26■□□□□ 0.51
LTBR-215ENST00000546296 MYO9BQ13459 2157 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 BIN1O00499 593 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 PODXLO00592 558 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 KIF4AO95239 1232 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 STIM1Q13586 685 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 SMC1AQ14683 1233 aaKnown RBP18.25■□□□□ 0.51
LTBR-215ENST00000546296 UPP1Q16831 310 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 TCEAL5Q5H9L2 206 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 KIAA1841Q6NSI8 718 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 CBWD2Q8IUF1 395 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 BRSK2Q8IWQ3 736 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 C12orf56Q8IXR9 622 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 PCDHGC5Q9Y5F6 944 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 KIAA1671Q9BY89 1806 aa18.25■□□□□ 0.51
LTBR-215ENST00000546296 SF3B1O75533 1304 aaKnown RBP eCLIP18.24■□□□□ 0.51
LTBR-215ENST00000546296 FSCN2O14926 492 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 NR3C1P04150 777 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 NFICP08651 508 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 CYP3A5P20815 502 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 PRCPP42785 496 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 ZBTB6Q15916 424 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 SNRNP35Q16560 246 aaKnown RBP18.24■□□□□ 0.51
LTBR-215ENST00000546296 FUT10Q6P4F1 479 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 TAS1R1Q7RTX1 841 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 CACTINQ8WUQ7 758 aaKnown RBP18.24■□□□□ 0.51
LTBR-215ENST00000546296 VN1R3Q9BXE9 311 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 CLSTN2Q9H4D0 955 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 IGFLR1Q9H665 355 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 TLE6Q9H808 572 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 KIAA1468Q9P260 1216 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 C2CD2Q9Y426 696 aa18.24■□□□□ 0.51
LTBR-215ENST00000546296 COL4A4P53420 1690 aaPredicted RBP18.24■□□□□ 0.51
LTBR-215ENST00000546296 TRAPPC3O43617 180 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 SOD2P04179 222 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 CTSAP10619 480 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 RPL13P26373 211 aaKnown RBP18.23■□□□□ 0.51
LTBR-215ENST00000546296 GUCY2FP51841 1108 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 TFAMQ00059 246 aaKnown RBP18.23■□□□□ 0.51
LTBR-215ENST00000546296 SURF1Q15526 300 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 SPATA1Q5VX52 437 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 RBM23Q86U06 439 aaKnown RBP18.23■□□□□ 0.51
LTBR-215ENST00000546296 MRPL43Q8N983 215 aaKnown RBP18.23■□□□□ 0.51
LTBR-215ENST00000546296 AUTS2Q8WXX7 1259 aa18.23■□□□□ 0.51
LTBR-215ENST00000546296 FBXL18Q96ME1 805 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms