RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 JADE1Q6IE81 842 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 CHRDL2Q6WN34 429 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 WDR49Q8IV35 697 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 DHX40Q8IX18 779 aaKnown RBP11.67□□□□□ -0.54
PAAF1-216ENST00000546039 PARD3BQ8TEW8 1205 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 KIF12Q96FN5 646 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 BORCS6Q96GS4 357 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 CASD1Q96PB1 797 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 PPP1R10Q96QC0 940 aaKnown RBP11.67□□□□□ -0.54
PAAF1-216ENST00000546039 PRO3102Q9H379 93 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 CBX8Q9HC52 389 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 PDE11AQ9HCR9 933 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 SLC38A7Q9NVC3 462 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 TBC1D13Q9NVG8 400 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 UBQLN1Q9UMX0 589 aaKnown RBP11.67□□□□□ -0.54
PAAF1-216ENST00000546039 INSL6Q9Y581 213 aa11.67□□□□□ -0.54
PAAF1-216ENST00000546039 COL4A4P53420 1690 aaPredicted RBP11.67□□□□□ -0.54
PAAF1-216ENST00000546039 ATG2AQ2TAZ0 1938 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 SMIM28A0A1B0GU29 152 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 CARNS1A5YM72 827 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 LRRIQ3A6PVS8 624 aaPredicted RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 GOLGA6L19H0YKK7 550 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 TLL1O43897 1013 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 STX10O60499 249 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 NFICP08651 508 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 TMEM191BP0C7N4 346 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 DLATP10515 647 aaKnown RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 CYP3A5P20815 502 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 EEF1GP26641 437 aaKnown RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 AP3M2P53677 418 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 WNT7BP56706 349 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 CLDN10P78369 228 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 RNASELQ05823 741 aaKnown RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 BTG3Q14201 252 aaPredicted RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 PAN2Q504Q3 1202 aaKnown RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 GLRA4Q5JXX5 417 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 TCERG1LQ5VWI1 586 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 TMCO2Q7Z6W1 182 aaPredicted RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 IRF2BP1Q8IU81 584 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 EFCAB13Q8IY85 973 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 GSTCDQ8NEC7 633 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 ANKRD20A12PQ8NF67 263 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 BEST2Q8NFU1 509 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 PLEKHO2Q8TD55 490 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 CACTINQ8WUQ7 758 aaKnown RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 CCDC127Q96BQ5 260 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 ANKRD36BP1Q96IX9 119 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 RAD9AQ99638 391 aa11.66□□□□□ -0.54
PAAF1-216ENST00000546039 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
PAAF1-216ENST00000546039 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.65□□□□□ -0.54
PAAF1-216ENST00000546039 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.65□□□□□ -0.54
PAAF1-216ENST00000546039 KCNJ18B7U540 433 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 N4BP1O75113 896 aaKnown RBP11.65□□□□□ -0.54
PAAF1-216ENST00000546039 POMCP01189 267 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 TNNC2P02585 160 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 ZNF18P17022 549 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 TNNI1P19237 187 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 GTF2H1P32780 548 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 MTIF2P46199 727 aaKnown RBP11.65□□□□□ -0.54
PAAF1-216ENST00000546039 TFAMQ00059 246 aaKnown RBP11.65□□□□□ -0.54
PAAF1-216ENST00000546039 DSC1Q08554 894 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 TUSC3Q13454 348 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 KCNJ12Q14500 433 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 NAB2Q15742 525 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 RAB30Q15771 203 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 ZBTB6Q15916 424 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 DCAF17Q5H9S7 520 aaPredicted RBP11.65□□□□□ -0.54
PAAF1-216ENST00000546039 PRPF38BQ5VTL8 546 aaKnown RBP11.65□□□□□ -0.54
PAAF1-216ENST00000546039 LUZP1Q86V48 1076 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 TRIM59Q8IWR1 403 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 UROC1Q96N76 676 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 FAM193BQ96PV7 902 aaPredicted RBP11.65□□□□□ -0.54
PAAF1-216ENST00000546039 CXCL16Q9H2A7 254 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 INTS13Q9NVM9 706 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 FANCLQ9NW38 375 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 MIOSQ9NXC5 875 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 PLAGL2Q9UPG8 496 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 PCDHA11Q9Y5I1 949 aa11.65□□□□□ -0.54
PAAF1-216ENST00000546039 TRIOBPQ9H2D6 2365 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 PTPRJQ12913 1337 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 TULP1O00294 542 aaPredicted RBP11.64□□□□□ -0.55
PAAF1-216ENST00000546039 TPM2P07951 284 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 TRIM49P0CI25 452 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 TRIM49CP0CI26 452 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 LAG3P18627 525 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 LRPAP1P30533 357 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 AFF1P51825 1210 aaKnown RBP11.64□□□□□ -0.55
PAAF1-216ENST00000546039 DLG4P78352 724 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 MAN2A1Q16706 1144 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 DUOXA2Q1HG44 320 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 TCP11X2Q5H9J9 407 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 LMBRD2Q68DH5 695 aaPredicted RBP11.64□□□□□ -0.55
PAAF1-216ENST00000546039 FAM109BQ6ICB4 259 aaPredicted RBP11.64□□□□□ -0.55
PAAF1-216ENST00000546039 FIBCD1Q8N539 461 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 SLC35C1Q96A29 364 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 TMEM175Q9BSA9 504 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 MTMR12Q9C0I1 747 aa11.64□□□□□ -0.55
PAAF1-216ENST00000546039 HSD3B7Q9H2F3 369 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms