RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SPECC1L-ADORA2AF8WAN1 911 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 GAS7O60861 476 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 MOSPD3O75425 235 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 JAK3P52333 1124 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 FGD1P98174 961 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 CCINQ13939 588 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 B4GALNT3Q6L9W6 998 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 CDR2LQ86X02 465 aaPredicted RBP17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 TEX2Q8IWB9 1127 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 MFSD6LQ8IWD5 586 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 HS6ST3Q8IZP7 471 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 CSGALNACT1Q8TDX6 532 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 LRRC2Q9BYS8 371 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 CSRNP2Q9H175 543 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 CXCL16Q9H2A7 254 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 TMEM9BQ9NQ34 198 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 SNTG2Q9NY99 539 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 SLC12A7Q9Y666 1083 aa17.16■□□□□ 0.34
CLSTN3-216ENST00000545663 BCLAF3A2AJT9 711 aaKnown RBP17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 EIF4E1BA6NMX2 242 aaKnown RBP17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 HEPACAM2A8MVW5 462 aa17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 PATE3B3GLJ2 98 aa17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 SEC24BO95487 1268 aa17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 SFNP31947 248 aa17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 MLLT6P55198 1093 aaPredicted RBP17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 GRIK3Q13003 919 aa17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 ZSCAN18Q8TBC5 510 aaPredicted RBP17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 DEPDC1BQ8WUY9 529 aa17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 SLC5A5Q92911 643 aa17.15■□□□□ 0.34
CLSTN3-216ENST00000545663 MYBPHLA2RUH7 354 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 ERLIN2O94905 339 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 PRB1P04280 392 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 CTHP32929 405 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 CIITAP33076 1130 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 LRCH2Q5VUJ6 765 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 NOTUMQ6P988 496 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 MIER3Q7Z3K6 550 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 TMTC2Q8N394 836 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 RNF149Q8NC42 400 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 EXOC6Q8TAG9 804 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 LRIG1Q96JA1 1093 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 ZFYVE19Q96K21 471 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 RIT2Q99578 217 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 OSBPL3Q9H4L5 887 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 C8orf33Q9H7E9 229 aaPredicted RBP17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 CACNA2D2Q9NY47 1150 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 MTRRQ9UBK8 725 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 PARP2Q9UGN5 583 aa17.14■□□□□ 0.33
CLSTN3-216ENST00000545663 ASXL3Q9C0F0 2248 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 CCDC163A0A0D9SF12 145 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 ARHGEF37A1IGU5 675 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 AKAP3O75969 853 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 LRG1P02750 347 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 TUSC3Q13454 348 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 PDZD4Q76G19 769 aaPredicted RBP17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 CHCHD4Q8N4Q1 142 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 LRRC3BQ96PB8 259 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 MKNK1Q9BUB5 465 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 TEKT3Q9BXF9 490 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 TRIM6Q9C030 488 aaPredicted RBP17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 VWA8A3KMH1 1905 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 EML5Q05BV3 1969 aa17.13■□□□□ 0.33
CLSTN3-216ENST00000545663 PDCD11Q14690 1871 aaKnown RBP17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 ZNF197O14709 1029 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 B4GALT5O43286 388 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 MICAL2O94851 1124 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 SEC24AO95486 1093 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 NPTXRO95502 500 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 FGFR3P22607 806 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 LIFRP42702 1097 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 SIM1P81133 766 aaPredicted RBP17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 SPIRE1Q08AE8 756 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 SCAPQ12770 1279 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 RTL10Q7L3V2 364 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 PSPC1Q8WXF1 523 aaKnown RBP17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 CCDC136Q96JN2 1154 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 GLT8D2Q9H1C3 349 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 TRPV4Q9HBA0 871 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 SLC8A2Q9UPR5 921 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 INVSQ9Y283 1065 aa17.12■□□□□ 0.33
CLSTN3-216ENST00000545663 HECTD1Q9ULT8 2610 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 ASCC3Q8N3C0 2202 aaKnown RBP17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 I3L4J1 428 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 PRRG1O14668 218 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 KHNYNO15037 678 aaKnown RBP17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 MEFVO15553 781 aaPredicted RBP17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 PSMD10O75832 226 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 MYL4P12829 197 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 ARF4P18085 180 aaPredicted RBP17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 IRX4P78413 519 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 AMHR2Q16671 573 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 PDXDC1Q6P996 788 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 RALGPS2Q86X27 583 aaPredicted RBP17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 YAF2Q8IY57 180 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 GLIS3Q8NEA6 775 aa17.11■□□□□ 0.33
CLSTN3-216ENST00000545663 FAM200AQ8TCP9 573 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms