RNA–Protein interactions for RNA: ENST00000545210.5

TMEM258-208, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-208ENST00000545210 LAIR1Q6GTX8 287 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.71□□□□□ -0.37
TMEM258-208ENST00000545210 PRR23BQ6ZRT6 265 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 MAEAQ7L5Y9 396 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 NOSTRINQ8IVI9 506 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 SLFN12Q8IYM2 578 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 ZNF687Q8N1G0 1237 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 PIGOQ8TEQ8 1089 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 DNASE1L2Q92874 299 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 ELSPBP1Q96BH3 223 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 CHAMP1Q96JM3 812 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 HSD17B14Q9BPX1 270 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 CHRDQ9H2X0 955 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 GPRC5CQ9NQ84 441 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 ANKEF1Q9NU02 776 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 MTRRQ9UBK8 725 aa12.71□□□□□ -0.37
TMEM258-208ENST00000545210 CITO14578 2027 aa12.71□□□□□ -0.38
TMEM258-208ENST00000545210 LAMA1P25391 3075 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 NRG2O14511 850 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-208ENST00000545210 SLC30A4O14863 429 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 USO1O60763 962 aaKnown RBP12.7□□□□□ -0.38
TMEM258-208ENST00000545210 LYPLA2O95372 231 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 PTPN2P17706 415 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 FCARP24071 287 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 RARRES1P49788 294 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 PPP2R5DQ14738 602 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 EARS2Q5JPH6 523 aaKnown RBP12.7□□□□□ -0.38
TMEM258-208ENST00000545210 PPP4R3CPQ6ZMV5 832 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 RUFY3Q7L099 469 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 RTL10Q7L3V2 364 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 CELF5Q8N6W0 485 aaKnown RBP12.7□□□□□ -0.38
TMEM258-208ENST00000545210 NETO1Q8TDF5 533 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 ZNF274Q96GC6 653 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-208ENST00000545210 PRIMPOLQ96LW4 560 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 NAP1L4Q99733 375 aaKnown RBP12.7□□□□□ -0.38
TMEM258-208ENST00000545210 BRD9Q9H8M2 597 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 PRMT7Q9NVM4 692 aaPredicted RBP12.7□□□□□ -0.38
TMEM258-208ENST00000545210 PCDHA12Q9UN75 941 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 USP20Q9Y2K6 914 aa12.7□□□□□ -0.38
TMEM258-208ENST00000545210 F5P12259 2224 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 FRYQ5TBA9 3013 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 I3L4J1 428 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 MAN2B1O00754 1011 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 N4BP3O15049 544 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 DTNBO60941 627 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 B3GAT3O94766 335 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 TKTP29401 623 aaKnown RBP12.69□□□□□ -0.38
TMEM258-208ENST00000545210 CLCNKBP51801 687 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 TMEM132AQ24JP5 1023 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 FAM78AQ5JUQ0 283 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 CPLX2Q6PUV4 134 aaKnown RBP12.69□□□□□ -0.38
TMEM258-208ENST00000545210 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 TCEAL4Q96EI5 215 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 DDX27Q96GQ7 796 aaKnown RBP12.69□□□□□ -0.38
TMEM258-208ENST00000545210 CORO1BQ9BR76 489 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 TRMT61BQ9BVS5 477 aaKnown RBP12.69□□□□□ -0.38
TMEM258-208ENST00000545210 FZD8Q9H461 694 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 LMAN1LQ9HAT1 526 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 ZFP14Q9HCL3 533 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 AVENQ9NQS1 362 aaPredicted RBP12.69□□□□□ -0.38
TMEM258-208ENST00000545210 SEMA4GQ9NTN9 838 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 GDAQ9Y2T3 454 aa12.69□□□□□ -0.38
TMEM258-208ENST00000545210 SPAG17Q6Q759 2223 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 ARHGEF37A1IGU5 675 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 TMEM189-UBE2V1I3L0A0 370 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 PRRG1O14668 218 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 GDF9O60383 454 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 LRP3O75074 770 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 LRG1P02750 347 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 RETP07949 1114 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 LIG1P18858 919 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 KCNA4P22459 653 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 CCR3P51677 355 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 PRPF4BQ13523 1007 aaKnown RBP12.68□□□□□ -0.38
TMEM258-208ENST00000545210 FAM187BQ17R55 369 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 GLRA4Q5JXX5 417 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 PRSS36Q5K4E3 855 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 CDCA2Q69YH5 1023 aaPredicted RBP12.68□□□□□ -0.38
TMEM258-208ENST00000545210 CD300LGQ6UXG3 332 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 PRR23CQ6ZRP0 262 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 ANKS3Q6ZW76 656 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 ZBTB8OSQ8IWT0 167 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 C3orf58Q8NDZ4 430 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 ZNF461Q8TAF7 563 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 FAM3CQ92520 227 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 ADPGKQ9BRR6 497 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 TTC12Q9H892 705 aaPredicted RBP12.68□□□□□ -0.38
TMEM258-208ENST00000545210 GOLGA2P5Q9HBQ8 144 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 ZSWIM6Q9HCJ5 1215 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 BACE2Q9Y5Z0 518 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 CYP46A1Q9Y6A2 500 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 EML5Q05BV3 1969 aa12.68□□□□□ -0.38
TMEM258-208ENST00000545210 NUP210Q8TEM1 1887 aaPredicted RBP12.68□□□□□ -0.38
TMEM258-208ENST00000545210 EDN1P05305 212 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 XBP1P17861 261 aa12.67□□□□□ -0.38
TMEM258-208ENST00000545210 ATP2B1P20020 1258 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms