RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RBM12Q9NTZ6 932 aaKnown RBP10.43□□□□□ -0.74
CHD4-212ENST00000545083 MTRRQ9UBK8 725 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 PCDHA4Q9UN74 947 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 CDY1Q9Y6F8 540 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 PIAS3Q9Y6X2 628 aa10.43□□□□□ -0.74
CHD4-212ENST00000545083 RALGAPA1Q6GYQ0 2036 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 A0A1B0GUA9 196 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 TTLL13PA6NNM8 815 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 DKC1O60832 514 aaKnown RBP eCLIP10.42□□□□□ -0.74
CHD4-212ENST00000545083 FGFR3P22607 806 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 GLRA2P23416 452 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 GDI1P31150 447 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 LIMK1P53667 647 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 NCBP1Q09161 790 aaKnown RBP10.42□□□□□ -0.74
CHD4-212ENST00000545083 CTTNQ14247 550 aaKnown RBP10.42□□□□□ -0.74
CHD4-212ENST00000545083 MXD4Q14582 209 aaPredicted RBP10.42□□□□□ -0.74
CHD4-212ENST00000545083 PPP2R5DQ14738 602 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 INF2Q27J81 1249 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 AASDHQ4L235 1098 aaPredicted RBP10.42□□□□□ -0.74
CHD4-212ENST00000545083 SLC27A1Q6PCB7 646 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 CD300LGQ6UXG3 332 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 VITQ6UXI7 678 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.42□□□□□ -0.74
CHD4-212ENST00000545083 Q6ZS52 159 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 SPEM1Q8N4L4 309 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 DYDC2Q96IM9 177 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 ZSWIM3Q96MP5 696 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 TRMT61BQ9BVS5 477 aaKnown RBP10.42□□□□□ -0.74
CHD4-212ENST00000545083 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
CHD4-212ENST00000545083 NCOA5Q9HCD5 579 aaKnown RBP10.42□□□□□ -0.74
CHD4-212ENST00000545083 ZFP14Q9HCL3 533 aa10.42□□□□□ -0.74
CHD4-212ENST00000545083 WDR27A2RRH5 827 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 C1QTNF9BB2RNN3 333 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 I3L4J1 428 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 MOSPD3O75425 235 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 C1QTNF9P0C862 333 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 IFNAR1P17181 557 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 CCNE1P24864 410 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 TKTP29401 623 aaKnown RBP10.41□□□□□ -0.74
CHD4-212ENST00000545083 ARL2P36404 184 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 VIPR2P41587 438 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 CYP4A11Q02928 519 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 POU5F1BQ06416 359 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 ELAVL2Q12926 359 aaKnown RBP10.41□□□□□ -0.74
CHD4-212ENST00000545083 PTGDRQ13258 359 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 TFDP1Q14186 410 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 EPHA7Q15375 998 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 PDXDC1Q6P996 788 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 LONP2Q86WA8 852 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 BLIDQ8IZY5 108 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 HAS1Q92839 578 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 IRF7Q92985 503 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 DDX27Q96GQ7 796 aaKnown RBP10.41□□□□□ -0.74
CHD4-212ENST00000545083 ASB16Q96NS5 453 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 CORO1BQ9BR76 489 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 C22orf23Q9BZE7 217 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 ARRDC1-AS1Q9H2J1 176 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 TRPV5Q9NQA5 729 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 SH3GLB2Q9NR46 395 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 SNTG2Q9NY99 539 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 ZMIZ1Q9ULJ6 1067 aa10.41□□□□□ -0.74
CHD4-212ENST00000545083 ARHGEF37A1IGU5 675 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 ARNTLO00327 626 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 AXIN1O15169 862 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 FOXD2O60548 495 aaPredicted RBP10.4□□□□□ -0.74
CHD4-212ENST00000545083 RECQL4O94761 1208 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 KCNK5O95279 499 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 PAPSS2O95340 614 aaPredicted RBP10.4□□□□□ -0.74
CHD4-212ENST00000545083 SEC24AO95486 1093 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 THP07101 528 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 PTPN2P17706 415 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 PSMC3P17980 439 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 CNR2P34972 360 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 SOX9P48436 509 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 CCT2P78371 535 aaKnown RBP10.4□□□□□ -0.74
CHD4-212ENST00000545083 FGD1P98174 961 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 ROR1Q01973 937 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 SPIRE1Q08AE8 756 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 ACAP1Q15027 740 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 STPG1Q5TH74 334 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 NCAPH2Q6IBW4 605 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 CEP68Q76N32 757 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 RTL10Q7L3V2 364 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 OTUD6AQ7L8S5 288 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 HS6ST3Q8IZP7 471 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 DAGLBQ8NCG7 672 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 RSPRY1Q96DX4 576 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 FAM20AQ96MK3 541 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 AIFM3Q96NN9 605 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 NFKBIZQ9BYH8 718 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 SMOC1Q9H4F8 434 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 USP20Q9Y2K6 914 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 BACE2Q9Y5Z0 518 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 TICRRQ7Z2Z1 1910 aa10.4□□□□□ -0.74
CHD4-212ENST00000545083 ARID2Q68CP9 1835 aa10.4□□□□□ -0.75
CHD4-212ENST00000545083 AKAP13Q12802 2813 aa10.39□□□□□ -0.75
CHD4-212ENST00000545083 TBX3O15119 743 aa10.39□□□□□ -0.75
CHD4-212ENST00000545083 ABLIM3O94929 683 aa10.39□□□□□ -0.75
CHD4-212ENST00000545083 SLITRK3O94933 977 aa10.39□□□□□ -0.75
CHD4-212ENST00000545083 LRG1P02750 347 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms