RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 LARP4BQ92615 738 aaKnown RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 RAD54LQ92698 747 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 ITPKCQ96DU7 683 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 PABPC5Q96DU9 382 aaKnown RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 EPSTI1Q96J88 318 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 ASB2Q96Q27 587 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 NTPCRQ9BSD7 190 aaKnown RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 APOL6Q9BWW8 343 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 CCDC113Q9H0I3 377 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 GBP3Q9H0R5 595 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 NRDE2Q9H7Z3 1164 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 UBE2ZQ9H832 354 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 TLR9Q9NR96 1032 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 RAB6BQ9NRW1 208 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 STK39Q9UEW8 545 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 PARP2Q9UGN5 583 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 FBXO2Q9UK22 296 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-224ENST00000544990 ODF2LQ9ULJ1 636 aa8.1□□□□□ -1.11
CPSF7-224ENST00000544990 ATG2AQ2TAZ0 1938 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 MYO7AQ13402 2215 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-224ENST00000544990 A6NJY4 79 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 NT5C1B-RDH14C9J2C7 533 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 MEN1O00255 615 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 SPTLC2O15270 562 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 INPPL1O15357 1258 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PPP6R2O75170 966 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 FAM13AO94988 1023 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 YEATS4O95619 227 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 F13A1P00488 732 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 POMCP01189 267 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 GALTP07902 379 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PLS3P13797 630 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 SCP2P22307 547 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 DNAJB1P25685 340 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 ABCD1P33897 745 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PTGIRP43119 386 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PRR20EP86478 221 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PRR20CP86479 221 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PRR20DP86480 221 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PRR20BP86481 221 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PRR20AP86496 221 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 STRN3Q13033 797 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 MAPK7Q13164 816 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 CBLBQ13191 982 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 CAMK1Q14012 370 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 BECN1Q14457 450 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 OCLNQ16625 522 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 DCAF4L1Q3SXM0 396 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 SPECC1Q5M775 1068 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 ATF7IP2Q5U623 682 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 FOXD4L5Q5VV16 416 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-224ENST00000544990 RRAGBQ5VZM2 374 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 CCDC73Q6ZRK6 1079 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 TMC7Q7Z402 723 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 DAW1Q8N136 415 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 SLC39A11Q8N1S5 342 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 LINC00301Q8NCQ3 95 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 FOXD4L4Q8WXT5 416 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-224ENST00000544990 CLIC6Q96NY7 704 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 RPS6KC1Q96S38 1066 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 GAD1Q99259 594 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 TMEM175Q9BSA9 504 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 KIFC3Q9BVG8 833 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 MRPL4Q9BYD3 311 aaKnown RBP8.09□□□□□ -1.11
CPSF7-224ENST00000544990 NXF3Q9H4D5 531 aaKnown RBP8.09□□□□□ -1.11
CPSF7-224ENST00000544990 PDZD7Q9H5P4 517 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 IGFLR1Q9H665 355 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 NGRNQ9NPE2 291 aaKnown RBP8.09□□□□□ -1.11
CPSF7-224ENST00000544990 ENTPD7Q9NQZ7 604 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 BLOC1S4Q9NUP1 217 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 TOR4AQ9NXH8 423 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 CLDND1Q9NY35 253 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 ARHGAP28Q9P2N2 729 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 STK17AQ9UEE5 414 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 CFAP45Q9UL16 551 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 TNFSF13BQ9Y275 285 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 FAN1Q9Y2M0 1017 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 HES2Q9Y543 173 aa8.09□□□□□ -1.11
CPSF7-224ENST00000544990 ZMYM2Q9UBW7 1377 aa8.09□□□□□ -1.12
CPSF7-224ENST00000544990 CHD7Q9P2D1 2997 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 TCF20Q9UGU0 1960 aaKnown RBP8.08□□□□□ -1.12
CPSF7-224ENST00000544990 A0A1W2PRU2 124 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 ARL5CA6NH57 179 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 SLC16A4O15374 487 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 TBCAO75347 108 aaKnown RBP8.08□□□□□ -1.12
CPSF7-224ENST00000544990 DDHD2O94830 711 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 STAU1O95793 577 aaKnown RBP8.08□□□□□ -1.12
CPSF7-224ENST00000544990 ABL1P00519 1130 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 KCNA5P22460 613 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 AKAP5P24588 427 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 CA8P35219 290 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 IRS1P35568 1242 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 PBX3P40426 434 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 MLH1P40692 756 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 ERVFC1P60507 584 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 RELBQ01201 579 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 TFF2Q03403 129 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 HYAL1Q12794 435 aa8.08□□□□□ -1.12
CPSF7-224ENST00000544990 GRIK3Q13003 919 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms