RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 HK1P19367 917 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 CSRP2Q16527 193 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 MINDY4Q4G0A6 757 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 PABPC1LQ4VXU2 614 aaKnown RBP3.04□□□□□ -1.92
YBX3-214ENST00000544501 IFIT1BQ5T764 474 aaKnown RBP3.04□□□□□ -1.92
YBX3-214ENST00000544501 B3GNT9Q6UX72 402 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 GADL1Q6ZQY3 521 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 EPM2AIP1Q7L775 607 aaPredicted RBP3.04□□□□□ -1.92
YBX3-214ENST00000544501 CATIPQ7Z7H3 387 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 C1orf210Q8IVY1 113 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 TPH2Q8IWU9 490 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 PALM2Q8IXS6 379 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 IL17RDQ8NFM7 739 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 FBXO18Q8NFZ0 1043 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 OR10H5Q8NGA6 315 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 SLC35G2Q8TBE7 412 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 KAT5Q92993 513 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 GPR20Q99678 358 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 NDC1Q9BTX1 674 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 PARPBPQ9NWS1 579 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 SIDT1Q9NXL6 827 aaKnown RBP3.04□□□□□ -1.92
YBX3-214ENST00000544501 GOLGA6AQ9NYA3 693 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 POGKQ9P215 609 aa3.04□□□□□ -1.92
YBX3-214ENST00000544501 KRTAP4-8A0A0G2JLE6 195 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 GRXCR1A8MXD5 290 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 H3BML4 177 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 ERC2O15083 957 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 PLSCR1O15162 318 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 AP1G1O43747 822 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 PPFIA4O75335 1185 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 FTLP02792 175 aaPredicted RBP3.03□□□□□ -1.92
YBX3-214ENST00000544501 MALP21145 153 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 SMARCA1P28370 1054 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 HK3P52790 923 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 ZNF280AP59817 542 aaPredicted RBP3.03□□□□□ -1.92
YBX3-214ENST00000544501 NOGQ13253 232 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 TOB2Q14106 344 aaPredicted RBP3.03□□□□□ -1.92
YBX3-214ENST00000544501 LRRC41Q15345 812 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 KHDC1Q4VXA5 237 aaKnown RBP3.03□□□□□ -1.92
YBX3-214ENST00000544501 USP39Q53GS9 565 aaKnown RBP3.03□□□□□ -1.92
YBX3-214ENST00000544501 RABL3Q5HYI8 236 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 SPDYAQ5MJ70 313 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 ZNF529Q6P280 563 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 RNF207Q6ZRF8 634 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 SYT12Q8IV01 421 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 RHOT2Q8IXI1 618 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 MYO1HQ8N1T3 1032 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 MAGEB6Q8N7X4 407 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 DCBLD1Q8N8Z6 715 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 IL17DQ8TAD2 202 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 DIS3LQ8TF46 1054 aaKnown RBP3.03□□□□□ -1.92
YBX3-214ENST00000544501 EXTL1Q92935 676 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 RGMAQ96B86 450 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 CLIP3Q96DZ5 547 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 TAAR9Q96RI9 348 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 REXO4Q9GZR2 422 aaKnown RBP3.03□□□□□ -1.92
YBX3-214ENST00000544501 WDCPQ9H6R7 721 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 GNL3LQ9NVN8 582 aaKnown RBP3.03□□□□□ -1.92
YBX3-214ENST00000544501 CEP72Q9P209 647 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 MYRFQ9Y2G1 1151 aa3.03□□□□□ -1.92
YBX3-214ENST00000544501 GAGE12BA1L429 117 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 GAGE12HA6NDE8 117 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 GRM6O15303 877 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 SLC43A1O75387 559 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 HAUS5O94927 633 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 ANXA1P04083 346 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 SPATA31D3P0C874 917 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 CKBP12277 381 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 GCSHP23434 173 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 BUD31P41223 144 aaPredicted RBP3.02□□□□□ -1.93
YBX3-214ENST00000544501 MAP2K6P52564 334 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 CHN2P52757 468 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 RAP2BP61225 183 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 NHLH2Q02577 135 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 FOXE3Q13461 319 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 SNAPC2Q13487 334 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 ZNF267Q14586 743 aaPredicted RBP3.02□□□□□ -1.93
YBX3-214ENST00000544501 MLC1Q15049 377 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 NRN1LQ496H8 165 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 MIIPQ5JXC2 388 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 FAM102AQ5T9C2 384 aaPredicted RBP3.02□□□□□ -1.93
YBX3-214ENST00000544501 AGAP9Q5VTM2 703 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 METRNLQ641Q3 311 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 ARMC6Q6NXE6 501 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 SLC4A10Q6U841 1118 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 SPATA31D4Q6ZUB0 917 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 MED25Q71SY5 747 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 GDF7Q7Z4P5 450 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 PDSS2Q86YH6 399 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 DENND1CQ8IV53 801 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 FMNL3Q8IVF7 1028 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 GRAMD1CQ8IYS0 662 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 FITM2Q8N6M3 262 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 RNF169Q8NCN4 708 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 SH3RF3Q8TEJ3 882 aaPredicted RBP3.02□□□□□ -1.93
YBX3-214ENST00000544501 RUNDC1Q96C34 613 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 PGBD4Q96DM1 585 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 ZNF503Q96F45 646 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 CDK5RAP3Q96JB5 506 aa3.02□□□□□ -1.93
YBX3-214ENST00000544501 FAM193BQ96PV7 902 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms