RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
CHD4-211ENST00000544484 MAGEB5Q9BZ81 275 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 UPP2O95045 317 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 HLA-DRAP01903 254 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 GYPCP04921 128 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 NUDCD3Q8IVD9 361 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 PGBD4Q96DM1 585 aa13.53□□□□□ -0.24
CHD4-211ENST00000544484 MMTAG2Q9BU76 263 aaKnown RBP13.53□□□□□ -0.24
CHD4-211ENST00000544484 UPF3AQ9H1J1 476 aaKnown RBP13.53□□□□□ -0.24
CHD4-211ENST00000544484 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 NFKBIAP25963 317 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 HADHAP40939 763 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 DHX34Q14147 1143 aaKnown RBP13.52□□□□□ -0.24
CHD4-211ENST00000544484 ANO4Q32M45 955 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 ITPRIPL1Q6GPH6 555 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 EFCAB12Q6NXP0 572 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 ELMSAN1Q6PJG2 1045 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 COG1Q8WTW3 980 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 BTBD6Q96KE9 485 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 ATP6V1G3Q96LB4 118 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 FAF1Q9UNN5 650 aaPredicted RBP13.52□□□□□ -0.24
CHD4-211ENST00000544484 TPI1P60174 286 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 HIF1AQ16665 826 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 TMEM259Q4ZIN3 620 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 TAS2R42Q7RTR8 314 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 SPATA2LQ8IUW3 424 aaPredicted RBP13.52□□□□□ -0.24
CHD4-211ENST00000544484 ATL2Q8NHH9 583 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 USP33Q8TEY7 942 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 ULK4Q96C45 1275 aa13.52□□□□□ -0.24
CHD4-211ENST00000544484 APRTP07741 180 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 ACTR2P61160 394 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 MDM2Q00987 491 aaPredicted RBP13.52□□□□□ -0.25
CHD4-211ENST00000544484 TAP1Q03518 808 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 EZH2Q15910 746 aaKnown RBP13.52□□□□□ -0.25
CHD4-211ENST00000544484 SEZ6Q53EL9 994 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 ACAD11Q709F0 780 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 RASGRP2Q7LDG7 609 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 NCLNQ969V3 563 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 ZNF235Q14590 738 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 E2F4Q16254 413 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 SGSM1Q2NKQ1 1148 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 FASTKD1Q53R41 847 aaKnown RBP13.52□□□□□ -0.25
CHD4-211ENST00000544484 PLEKHA5Q9HAU0 1116 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 DIP2AQ14689 1571 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 IQSEC2Q5JU85 1478 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 ABCA9Q8IUA7 1624 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 SSU72P8A0A1W2PR75 194 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 NNMTP40261 264 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 EDRF1Q3B7T1 1238 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 FAM117BQ6P1L5 589 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 CXorf38Q8TB03 319 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 EGFL8Q99944 293 aa13.52□□□□□ -0.25
CHD4-211ENST00000544484 GUCY1A3Q02108 690 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 ATF7IP2Q5U623 682 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 ZBTB18Q99592 522 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 SENP7Q9BQF6 1050 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 MSH4O15457 936 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 STYK1Q6J9G0 422 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 C9orf72Q96LT7 481 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 RIT2Q99578 217 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 TJP2Q9UDY2 1190 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 CCL15-CCL14A0A0B4J2E2 113 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 F8W8V4 182 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 FXR2P51116 673 aaKnown RBP eCLIP13.51□□□□□ -0.251e-8■■■■■ 27.8
CHD4-211ENST00000544484 CCL15Q16663 113 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 P3H1Q32P28 736 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 SNX19Q92543 992 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 ANGPTL2Q9UKU9 493 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 KIAA0391O15091 583 aaKnown RBP13.51□□□□□ -0.25
CHD4-211ENST00000544484 SLC1A1P43005 524 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 KYAT1Q16773 422 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 TKFCQ3LXA3 575 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 SH2D3CQ8N5H7 860 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 NDFIP2Q9NV92 336 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 RSPH10B2B2RC85 870 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 PPP1R3GB7ZBB8 358 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 PPP1R12AO14974 1030 aaPredicted RBP13.51□□□□□ -0.25
CHD4-211ENST00000544484 HAUS5O94927 633 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 ESRRBO95718 433 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 RSPH10BP0C881 870 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 HSD17B4P51659 736 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 PPP4CP60510 307 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 IMPG1Q17R60 797 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 UBA3Q8TBC4 463 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 LRRC37BQ96QE4 947 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 ITIH6Q6UXX5 1313 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 LMTK2Q8IWU2 1503 aa13.51□□□□□ -0.25
CHD4-211ENST00000544484 SKIP12755 728 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 ARFIP2P53365 341 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 EPAS1Q99814 870 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 CYP4F11Q9HBI6 524 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 ZFATQ9P243 1243 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 TADA2AO75478 443 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 ZFXP17010 805 aaPredicted RBP13.5□□□□□ -0.25
CHD4-211ENST00000544484 VEPH1Q14D04 833 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 SMTNL2Q2TAL5 461 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 NLRP14Q86W24 1093 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 UNC45AQ9H3U1 944 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 KCND2Q9NZV8 630 aa13.5□□□□□ -0.25
CHD4-211ENST00000544484 UVRAGQ9P2Y5 699 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms