RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 TPH2Q8IWU9 490 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 C3orf58Q8NDZ4 430 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 BSNDQ8WZ55 320 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 ELSPBP1Q96BH3 223 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 EIF2AK1Q9BQI3 630 aaKnown RBP10.51□□□□□ -0.73
C2CD3-220ENST00000544293 SLKQ9H2G2 1235 aaPredicted RBP10.51□□□□□ -0.73
C2CD3-220ENST00000544293 GDE1Q9NZC3 331 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 MRPS23Q9Y3D9 190 aaKnown RBP10.51□□□□□ -0.73
C2CD3-220ENST00000544293 ZMYM2Q9UBW7 1377 aa10.51□□□□□ -0.73
C2CD3-220ENST00000544293 CHD6Q8TD26 2715 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 NOTCH4Q99466 2003 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.5□□□□□ -0.73
C2CD3-220ENST00000544293 I3L4J1 428 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 ARNTLO00327 626 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 XYLBO75191 536 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 RECQL4O94761 1208 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 ABLIM3O94929 683 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 DEXIO95424 95 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 SEC24AO95486 1093 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 RETP07949 1114 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 SATB1Q01826 763 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 GRM2Q14416 872 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 FAM187BQ17R55 369 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 EEF1DP3Q658K8 133 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 CDCA2Q69YH5 1023 aaPredicted RBP10.5□□□□□ -0.73
C2CD3-220ENST00000544293 NCAPH2Q6IBW4 605 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 GALNT17Q6IS24 598 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 NEK8Q86SG6 692 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 NOSTRINQ8IVI9 506 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 CELF5Q8N6W0 485 aaKnown RBP10.5□□□□□ -0.73
C2CD3-220ENST00000544293 PIGOQ8TEQ8 1089 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 TNFRSF25Q93038 417 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 RSPRY1Q96DX4 576 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
C2CD3-220ENST00000544293 FAM126AQ9BYI3 521 aaPredicted RBP10.5□□□□□ -0.73
C2CD3-220ENST00000544293 TRIM6Q9C030 488 aaPredicted RBP10.5□□□□□ -0.73
C2CD3-220ENST00000544293 PDZD7Q9H5P4 517 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 LMAN1LQ9HAT1 526 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 ZSWIM6Q9HCJ5 1215 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 ZNF334Q9HCZ1 680 aaPredicted RBP10.5□□□□□ -0.73
C2CD3-220ENST00000544293 SEMA4GQ9NTN9 838 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 ANKEF1Q9NU02 776 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 NDRG2Q9UN36 371 aaKnown RBP10.5□□□□□ -0.73
C2CD3-220ENST00000544293 BACE2Q9Y5Z0 518 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 CDY1Q9Y6F8 540 aa10.5□□□□□ -0.73
C2CD3-220ENST00000544293 ARHGEF37A1IGU5 675 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 TMEM189-UBE2V1I3L0A0 370 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 K7ESF4 209 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 HAX1O00165 279 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 NCAM2O15394 837 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 CCNT1O60563 726 aaKnown RBP10.49□□□□□ -0.73
C2CD3-220ENST00000544293 DGAT1O75907 488 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 THP07101 528 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 SPATA31C1P0DKV0 1188 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 TKTP29401 623 aaKnown RBP10.49□□□□□ -0.73
C2CD3-220ENST00000544293 BRCC3P46736 316 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 CLCNKBP51801 687 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 SOX4Q06945 474 aaPredicted RBP10.49□□□□□ -0.73
C2CD3-220ENST00000544293 NCBP1Q09161 790 aaKnown RBP10.49□□□□□ -0.73
C2CD3-220ENST00000544293 TFDP1Q14186 410 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 UPP1Q16831 310 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 LAIR1Q6GTX8 287 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 VITQ6UXI7 678 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.49□□□□□ -0.73
C2CD3-220ENST00000544293 PIK3AP1Q6ZUJ8 805 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 RTL10Q7L3V2 364 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 HS6ST3Q8IZP7 471 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 NETO1Q8TDF5 533 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 DNASE1L2Q92874 299 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 YTHDC1Q96MU7 727 aaKnown RBP10.49□□□□□ -0.73
C2CD3-220ENST00000544293 ASB16Q96NS5 453 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 LRRC3BQ96PB8 259 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 PPP1R10Q96QC0 940 aaKnown RBP10.49□□□□□ -0.73
C2CD3-220ENST00000544293 CCDC113Q9H0I3 377 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 POLR3FQ9H1D9 316 aaPredicted RBP10.49□□□□□ -0.73
C2CD3-220ENST00000544293 TRPV5Q9NQA5 729 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 RXFP3Q9NSD7 469 aa10.49□□□□□ -0.73
C2CD3-220ENST00000544293 WDR27A2RRH5 827 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 MEFVO15553 781 aaPredicted RBP10.48□□□□□ -0.73
C2CD3-220ENST00000544293 CTDNEP1O95476 244 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 GCFC2P16383 781 aaKnown RBP10.48□□□□□ -0.73
C2CD3-220ENST00000544293 PTPN2P17706 415 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 PMLP29590 882 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 VIPR2P41587 438 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 ROR1Q01973 937 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 MRPL58Q14197 206 aaKnown RBP10.48□□□□□ -0.73
C2CD3-220ENST00000544293 CSRP2Q16527 193 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 GLRA4Q5JXX5 417 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 N4BP2L1Q5TBK1 243 aaPredicted RBP10.48□□□□□ -0.73
C2CD3-220ENST00000544293 SLC8B1Q6J4K2 584 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 PRR23CQ6ZRP0 262 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 MAEAQ7L5Y9 396 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 ZNF461Q8TAF7 563 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 FAM3CQ92520 227 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 SECISBP2LQ93073 1101 aaKnown RBP10.48□□□□□ -0.73
C2CD3-220ENST00000544293 ZNF274Q96GC6 653 aaPredicted RBP10.48□□□□□ -0.73
C2CD3-220ENST00000544293 MTMR9Q96QG7 549 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 GOLGA2P5Q9HBQ8 144 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 POLD4Q9HCU8 107 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 CEP72Q9P209 647 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms