RNA–Protein interactions for RNA: ENST00000542128.5

KDM3A-216, Transcript of lysine demethylase 3A, humanhuman

TSL 5 BASIC

Gene KDM3A, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-216ENST00000542128 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 GBA2Q9HCG7 927 aaPredicted RBP13.16□□□□□ -0.3
KDM3A-216ENST00000542128 GDF3Q9NR23 364 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 FEM1BQ9UK73 627 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 CDH16O75309 829 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 INHBAP08476 426 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 S100A1P23297 94 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 CHRNA3P32297 505 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 ATP1A4Q13733 1029 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 LRRC41Q15345 812 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
KDM3A-216ENST00000542128 MTERF2Q49AM1 385 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 TBCKQ8TEA7 893 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 DDI1Q8WTU0 396 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 PPP1R14BQ96C90 147 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 COQ7Q99807 217 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 ROPN1BQ9BZX4 212 aaPredicted RBP13.16□□□□□ -0.3
KDM3A-216ENST00000542128 PAIP1Q9H074 479 aaKnown RBP13.16□□□□□ -0.3
KDM3A-216ENST00000542128 ROPN1Q9HAT0 212 aaPredicted RBP13.16□□□□□ -0.3
KDM3A-216ENST00000542128 CEP72Q9P209 647 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 ANKFY1Q9P2R3 1169 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 COL4A3BPQ9Y5P4 624 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 TCHHQ07283 1943 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 MGEA5O60502 916 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 AKR1B1P15121 316 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 SREBF2Q12772 1141 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 COG2Q14746 738 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 ZNF280CQ8ND82 737 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 NSUN4Q96CB9 384 aaKnown RBP13.16□□□□□ -0.3
KDM3A-216ENST00000542128 MMP19Q99542 508 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 SPATA7Q9P0W8 599 aa13.16□□□□□ -0.3
KDM3A-216ENST00000542128 WARS2Q9UGM6 360 aaKnown RBP13.16□□□□□ -0.3
KDM3A-216ENST00000542128 PNMA6FA0A0J9YX94 578 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 UNC5CO95185 931 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 CYP2J2P51589 502 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 EXOSC10Q01780 885 aaKnown RBP13.15□□□□□ -0.3
KDM3A-216ENST00000542128 DMP1Q13316 513 aaPredicted RBP13.15□□□□□ -0.3
KDM3A-216ENST00000542128 STKLD1Q8NE28 680 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 CENPTQ96BT3 561 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 ERP44Q9BS26 406 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 MYO5BQ9ULV0 1848 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 K7ENM7 598 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
KDM3A-216ENST00000542128 ENTPD3O75355 529 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 KRT8P05787 483 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 CSF1RP07333 972 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 LINGO3P0C6S8 592 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 CCDC159P0C7I6 412 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 BCRP11274 1271 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 NCF2P19878 526 aaPredicted RBP13.15□□□□□ -0.3
KDM3A-216ENST00000542128 DNAL1Q4LDG9 190 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 IYDQ6PHW0 289 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 NLRP9Q7RTR0 991 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 CCNJLQ8IV13 435 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 MREGQ8N565 214 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 NSUN6Q8TEA1 469 aaKnown RBP13.15□□□□□ -0.3
KDM3A-216ENST00000542128 EFHD1Q9BUP0 239 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 KIAA1024Q9UPX6 916 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 H3BRJ5 948 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 KLRC1P26715 233 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 FAM26FQ5R3K3 315 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 HHIPL2Q6UWX4 724 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■□□□□ 9.3
KDM3A-216ENST00000542128 PHTF1Q9UMS5 762 aa13.15□□□□□ -0.3
KDM3A-216ENST00000542128 SMIM31A0A1B0GVY4 71 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 SSU72P8A0A1W2PR75 194 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 SHBGP04278 402 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 CETPP11597 493 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 ERVK-9P63128 1117 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 TMPRSS15P98073 1019 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.31
KDM3A-216ENST00000542128 CCDC137Q6PK04 289 aaKnown RBP13.15□□□□□ -0.31
KDM3A-216ENST00000542128 USP33Q8TEY7 942 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 DCAF4Q8WV16 495 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 ANKS1AQ92625 1134 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 MAGEF1Q9HAY2 307 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 MRGBPQ9NV56 204 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 NMRK1Q9NWW6 199 aa13.15□□□□□ -0.31
KDM3A-216ENST00000542128 UBR1Q8IWV7 1749 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 SYNGAP1Q96PV0 1343 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 PABPN1LA6NDY0 278 aaKnown RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 H0YCG3 227 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 SMAPO00193 183 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TJP3O95049 919 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 TRPC1P48995 793 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 KLK7P49862 253 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 IFI35P80217 286 aaPredicted RBP13.14□□□□□ -0.31
KDM3A-216ENST00000542128 DPYDQ12882 1025 aa13.14□□□□□ -0.31
KDM3A-216ENST00000542128 IFRD2Q12894 506 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms