RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PALD1Q9ULE6 856 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 AFG3L2Q9Y4W6 797 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 ATP23Q9Y6H3 246 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 MAST2Q6P0Q8 1798 aa6.36□□□□□ -1.39
CPSF7-220ENST00000541963 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 DOCK2Q92608 1830 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 TCRBV5S4A2TA0A5A2 114 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 NOTOA8MTQ0 251 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 C19orf81C9J6K1 198 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 BTBD19C9JJ37 291 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 PDHXO00330 501 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 BIN1O00499 593 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 NKRFO15226 690 aaKnown RBP eCLIP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 RNF113AO15541 343 aaKnown RBP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 TLR2O60603 784 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 GLI4P10075 376 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 GNAT2P19087 354 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 MX1P20591 662 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 HOXD10P28358 340 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 IRF9Q00978 393 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 CRHR2Q13324 411 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 KIR3DS1Q14943 382 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 SKOR2Q2VWA4 1001 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 CERKLQ49MI3 558 aaPredicted RBP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 ERICH6BQ5W0A0 696 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 NFXL1Q6ZNB6 911 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 GADL1Q6ZQY3 521 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 OTOP1Q7RTM1 612 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 FAM43AQ8N2R8 423 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 EXOC6Q8TAG9 804 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 UHMK1Q8TAS1 419 aaKnown RBP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 CHTF18Q8WVB6 975 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 EDC3Q96F86 508 aaKnown RBP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 ABHD8Q96I13 439 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 PARK7Q99497 189 aaKnown RBP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 MCOLN1Q9GZU1 580 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 PUS7LQ9H0K6 701 aaKnown RBP6.35□□□□□ -1.39
CPSF7-220ENST00000541963 C19orf73Q9NVV2 129 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 TMOD4Q9NZQ9 345 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 SWAP70Q9UH65 585 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 SLC45A1Q9Y2W3 748 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 PCDHB4Q9Y5E5 795 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 SLC4A4Q9Y6R1 1079 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 PCNTO95613 3336 aa6.35□□□□□ -1.39
CPSF7-220ENST00000541963 MYO5AQ9Y4I1 1855 aaKnown RBP6.34□□□□□ -1.39
CPSF7-220ENST00000541963 A0A0G2JLL6 359 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-220ENST00000541963 TRIM75PA6NK02 468 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 MBD4O95243 580 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 ATP2A2P16615 1042 aaKnown RBP6.34□□□□□ -1.39
CPSF7-220ENST00000541963 GJA4P35212 333 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 ADCYAP1R1P41586 468 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 ITKQ08881 620 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 SPP2Q13103 211 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 SLC9A5Q14940 896 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 RAB3GAP1Q15042 981 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 FIGNQ5HY92 759 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 EMC4Q5J8M3 183 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 HABP4Q5JVS0 413 aaKnown RBP6.34□□□□□ -1.39
CPSF7-220ENST00000541963 OLFML2BQ68BL8 750 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 TATDN1Q6P1N9 297 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 FBXO46Q6PJ61 603 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-220ENST00000541963 PRRT2Q7Z6L0 340 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-220ENST00000541963 MILR1Q7Z6M3 343 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 TICAM2Q86XR7 235 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 LCORLQ8N3X6 602 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 EFHBQ8N7U6 833 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 EVI5LQ96CN4 794 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 YIPF4Q9BSR8 244 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 FSD1Q9BTV5 496 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 NACAP1Q9BZK3 213 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 SLC6A17Q9H1V8 727 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 ARMT1Q9H993 441 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 ZNF287Q9HBT7 754 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 SMURF1Q9HCE7 757 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 DCP1AQ9NPI6 582 aaPredicted RBP6.34□□□□□ -1.39
CPSF7-220ENST00000541963 ACSS2Q9NR19 701 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 OXSMQ9NWU1 459 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 MYOTQ9UBF9 498 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 SRPK3Q9UPE1 567 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 YBX2Q9Y2T7 364 aaKnown RBP6.34□□□□□ -1.39
CPSF7-220ENST00000541963 TRIM17Q9Y577 477 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 OTOFQ9HC10 1997 aa6.34□□□□□ -1.39
CPSF7-220ENST00000541963 MYH1P12882 1939 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.33□□□□□ -1.4
CPSF7-220ENST00000541963 ZC3H12DA2A288 527 aaKnown RBP6.33□□□□□ -1.4
CPSF7-220ENST00000541963 SCDO00767 359 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 ABLIM1O14639 778 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 KCNK3O14649 394 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 SLC27A2O14975 620 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 CLASP2O75122 1294 aaKnown RBP6.33□□□□□ -1.4
CPSF7-220ENST00000541963 TADA3O75528 432 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 AMY2AP04746 511 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 SLC3A2P08195 630 aaKnown RBP6.33□□□□□ -1.4
CPSF7-220ENST00000541963 DBHP09172 617 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 AMY2BP19961 511 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 PLCD1P51178 756 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 USP14P54578 494 aa6.33□□□□□ -1.4
CPSF7-220ENST00000541963 GP2P55259 537 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms