RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 OSBP2Q969R2 916 aa7.56□□□□□ -1.2
TTR-203ENST00000541025 RBM15Q96T37 977 aaKnown RBP eCLIP7.56□□□□□ -1.2
TTR-203ENST00000541025 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
TTR-203ENST00000541025 TRIM55Q9BYV6 548 aa7.56□□□□□ -1.2
TTR-203ENST00000541025 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.56□□□□□ -1.2
TTR-203ENST00000541025 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.56□□□□□ -1.2
TTR-203ENST00000541025 HSPBP1Q9NZL4 362 aa7.56□□□□□ -1.2
TTR-203ENST00000541025 COL11A1P12107 1806 aaPredicted RBP7.56□□□□□ -1.2
TTR-203ENST00000541025 CENPFP49454 3210 aa7.56□□□□□ -1.2
TTR-203ENST00000541025 RLFQ13129 1914 aa7.56□□□□□ -1.2
TTR-203ENST00000541025 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 M0R2C6 588 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 DDX3XO00571 662 aaKnown RBP eCLIP7.55□□□□□ -1.23e-12■■■□□ 14.8
TTR-203ENST00000541025 ERC2O15083 957 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 CA12O43570 354 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 CYP7B1O75881 506 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 GRIA2P42262 883 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 PLCD1P51178 756 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 SREBF2Q12772 1141 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 PPIL2Q13356 520 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 ADAM9Q13443 819 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 MOGSQ13724 837 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 UBE3CQ15386 1083 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 SCYL3Q8IZE3 742 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 FAM43AQ8N2R8 423 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 ARRDC4Q8NCT1 418 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 SEC62Q99442 399 aaKnown RBP7.55□□□□□ -1.2
TTR-203ENST00000541025 DHX36Q9H2U1 1008 aaKnown RBP7.55□□□□□ -1.2
TTR-203ENST00000541025 SAGE1Q9NXZ1 904 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 PI4KBQ9UBF8 816 aa7.55□□□□□ -1.2
TTR-203ENST00000541025 DOCK3Q8IZD9 2030 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 CYP2D7A0A087X1C5 515 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 CCL15-CCL14A0A0B4J2E2 113 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 KRIT1O00522 736 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 RNF113AO15541 343 aaKnown RBP7.54□□□□□ -1.2
TTR-203ENST00000541025 CTNND1O60716 968 aaKnown RBP7.54□□□□□ -1.2
TTR-203ENST00000541025 PPATQ06203 517 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 CCL15Q16663 113 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 TEPPQ6URK8 271 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 CERS3Q8IU89 383 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 TRIM48Q8IWZ4 208 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 APPBP2Q92624 585 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 LCORQ96JN0 433 aaPredicted RBP7.54□□□□□ -1.2
TTR-203ENST00000541025 CLIC6Q96NY7 704 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 STRBPQ96SI9 672 aaKnown RBP7.54□□□□□ -1.2
TTR-203ENST00000541025 IER2Q9BTL4 223 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 FSD1Q9BTV5 496 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 CRNKL1Q9BZJ0 848 aaKnown RBP7.54□□□□□ -1.2
TTR-203ENST00000541025 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 SLC6A20Q9NP91 592 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 HERC5Q9UII4 1024 aaKnown RBP7.54□□□□□ -1.2
TTR-203ENST00000541025 AFG3L2Q9Y4W6 797 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 PLXNB2O15031 1838 aa7.54□□□□□ -1.2
TTR-203ENST00000541025 A0A0G2JMZ2 1700 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 BTBD19C9JJ37 291 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 DLX3O60479 287 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 PLATP00750 562 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 HLA-DOAP06340 250 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 ZFYP08048 801 aaPredicted RBP7.53□□□□□ -1.2
TTR-203ENST00000541025 SHMT1P34896 483 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 MAGEA10P43363 369 aaPredicted RBP7.53□□□□□ -1.2
TTR-203ENST00000541025 INHBEP58166 350 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 GABPAQ06546 454 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 CRHR2Q13324 411 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 SNAPC2Q13487 334 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 ZXDCQ2QGD7 858 aaPredicted RBP7.53□□□□□ -1.2
TTR-203ENST00000541025 ZSCAN25Q6NSZ9 544 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 TATDN1Q6P1N9 297 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 CCDC129Q6ZRS4 1044 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 DPH6Q7L8W6 267 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 NOP9Q86U38 636 aaKnown RBP7.53□□□□□ -1.2
TTR-203ENST00000541025 GGNQ86UU5 652 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 FOXP4Q8IVH2 680 aaPredicted RBP7.53□□□□□ -1.2
TTR-203ENST00000541025 SLC44A5Q8NCS7 719 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 DYNLL2Q96FJ2 89 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 ATP8A2Q9NTI2 1148 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 MCM9Q9NXL9 1143 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 MYOTQ9UBF9 498 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 SERPINB13Q9UIV8 391 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 MSRB2Q9Y3D2 182 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 SLC4A4Q9Y6R1 1079 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 ZHX2Q9Y6X8 837 aa7.53□□□□□ -1.2
TTR-203ENST00000541025 TRIM75PA6NK02 468 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 GSG1L2A8MUP6 293 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 FOXP2O15409 715 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 GPAA1O43292 621 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 LRG1P02750 347 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 CETPP11597 493 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 ZNF28P17035 718 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 SERINC3Q13530 473 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 SURF1Q15526 300 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 CTR9Q6PD62 1173 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 SKAP1Q86WV1 359 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 DCAF4Q8WV16 495 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 EVI5LQ96CN4 794 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 FAM227BQ96M60 508 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 TMEM209Q96SK2 561 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 GPR20Q99678 358 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 ZBTB21Q9ULJ3 1066 aa7.52□□□□□ -1.21
TTR-203ENST00000541025 INVSQ9Y283 1065 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms