RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 CDT1Q9H211 546 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 HCFC1R1Q9NWW0 138 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 NOL7Q9UMY1 257 aaKnown RBP17.85■□□□□ 0.45
TRIM65-203ENST00000540812 PCDHB6Q9Y5E3 794 aa17.85■□□□□ 0.45
TRIM65-203ENST00000540812 TRIP11Q15643 1979 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 SMIM28A0A1B0GU29 152 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 CCDC169A6NNP5 214 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 E9PMD0 336 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 K7ERI5 159 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 XYLBO75191 536 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 GRM5P41594 1212 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 NPTX2P47972 431 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 OSTNP61366 133 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 PTGDRQ13258 359 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 IL17AQ16552 155 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 PHLDB3Q6NSJ2 640 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 ADSSL1Q8N142 457 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 DDX27Q96GQ7 796 aaKnown RBP17.84■□□□□ 0.45
TRIM65-203ENST00000540812 KIF2CQ99661 725 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 RUSC1Q9BVN2 902 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 PTPRHQ9HD43 1115 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 DLGAP2Q9P1A6 1054 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 DNMT3BQ9UBC3 853 aaKnown RBP17.84■□□□□ 0.45
TRIM65-203ENST00000540812 TNFSF13BQ9Y275 285 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 CDY1Q9Y6F8 540 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 NOTCH4Q99466 2003 aa17.84■□□□□ 0.45
TRIM65-203ENST00000540812 PHLPP2Q6ZVD8 1323 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 HIP1RO75146 1068 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 POU2F2P09086 479 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 U2AF2P26368 475 aaKnown RBP eCLIP17.83■□□□□ 0.442e-8■■■□□ 18.5
TRIM65-203ENST00000540812 CDC25AP30304 524 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 PDIA5Q14554 519 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 XKR4Q5GH76 650 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 ALKAL1Q6UXT8 129 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 KCNK18Q7Z418 384 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 SNX27Q96L92 541 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 ZMAT2Q96NC0 199 aaKnown RBP17.83■□□□□ 0.44
TRIM65-203ENST00000540812 TARS2Q9BW92 718 aaKnown RBP17.83■□□□□ 0.44
TRIM65-203ENST00000540812 SH2B1Q9NRF2 756 aaPredicted RBP17.83■□□□□ 0.44
TRIM65-203ENST00000540812 ARHGAP28Q9P2N2 729 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 SIT1Q9Y3P8 196 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 BACE2Q9Y5Z0 518 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 COL4A3Q01955 1670 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 ZNF292O60281 2723 aa17.83■□□□□ 0.44
TRIM65-203ENST00000540812 LRRN2O75325 713 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 GLULP15104 373 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 MAPK7Q13164 816 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 UVSSAQ2YD98 709 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 ZNF568Q3ZCX4 644 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 PABPC1LQ4VXU2 614 aaKnown RBP17.82■□□□□ 0.44
TRIM65-203ENST00000540812 APBB1IPQ7Z5R6 666 aaPredicted RBP17.82■□□□□ 0.44
TRIM65-203ENST00000540812 NPAS3Q8IXF0 933 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 ING5Q8WYH8 240 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 ZSCAN31Q96LW9 406 aaPredicted RBP17.82■□□□□ 0.44
TRIM65-203ENST00000540812 UROC1Q96N76 676 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 KXD1Q9BQD3 176 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 MMTAG2Q9BU76 263 aaKnown RBP17.82■□□□□ 0.44
TRIM65-203ENST00000540812 CCDC94Q9BW85 323 aaPredicted RBP17.82■□□□□ 0.44
TRIM65-203ENST00000540812 MRPL4Q9BYD3 311 aaKnown RBP17.82■□□□□ 0.44
TRIM65-203ENST00000540812 TMEM134Q9H6X4 195 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 DNM3Q9UQ16 869 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 FRYLO94915 3013 aa17.82■□□□□ 0.44
TRIM65-203ENST00000540812 MYH15Q9Y2K3 1946 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 ABLIM1O14639 778 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 MEFVO15553 781 aaPredicted RBP17.81■□□□□ 0.44
TRIM65-203ENST00000540812 PROZP22891 400 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 YARSP54577 528 aaKnown RBP17.81■□□□□ 0.44
TRIM65-203ENST00000540812 STARD6P59095 220 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 DMP1Q13316 513 aaPredicted RBP17.81■□□□□ 0.44
TRIM65-203ENST00000540812 SNW1Q13573 536 aaKnown RBP17.81■□□□□ 0.44
TRIM65-203ENST00000540812 KRT79Q5XKE5 535 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 RINT1Q6NUQ1 792 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 POTEHQ6S545 545 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 ANKS3Q6ZW76 656 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 C1orf186Q6ZWK4 172 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 MTSS1LQ765P7 747 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 KMT5AQ9NQR1 393 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 R4GN57 208 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 DNAH14Q0VDD8 3507 aa17.81■□□□□ 0.44
TRIM65-203ENST00000540812 CACNA1IQ9P0X4 2223 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 SFI1A8K8P3 1242 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 PODXLO00592 558 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 SLC16A4O15374 487 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 TRAPPC3O43617 180 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 HARSP12081 509 aaKnown RBP17.8■□□□□ 0.44
TRIM65-203ENST00000540812 ROR1Q01973 937 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 SLC5A9Q2M3M2 681 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 VARS2Q5ST30 1063 aaKnown RBP17.8■□□□□ 0.44
TRIM65-203ENST00000540812 PJA1Q8NG27 643 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 C18orf25Q96B23 403 aaPredicted RBP17.8■□□□□ 0.44
TRIM65-203ENST00000540812 ZBTB45Q96K62 511 aaPredicted RBP17.8■□□□□ 0.44
TRIM65-203ENST00000540812 DRC1Q96MC2 740 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 ACAP3Q96P50 834 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 RAB34Q9BZG1 259 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 TOPORSQ9NS56 1045 aaPredicted RBP17.8■□□□□ 0.44
TRIM65-203ENST00000540812 KCNH3Q9ULD8 1083 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
TRIM65-203ENST00000540812 DMXL1Q9Y485 3027 aa17.79■□□□□ 0.44
TRIM65-203ENST00000540812 WDR27A2RRH5 827 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms