RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 CCDC192P0DO97 292 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 GSPT1P15170 499 aaKnown RBP17.2■□□□□ 0.34
PUDP-206ENST00000540122 CHMLP26374 656 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 CCR2P41597 374 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 SOX9P48436 509 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 PXNP49023 591 aaPredicted RBP17.2■□□□□ 0.34
PUDP-206ENST00000540122 PCBP1Q15365 356 aaKnown RBP eCLIP17.2■□□□□ 0.34
PUDP-206ENST00000540122 PFKFB3Q16875 520 aaPredicted RBP17.2■□□□□ 0.34
PUDP-206ENST00000540122 DAB2IPQ5VWQ8 1189 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 C1orf228Q6PIY5 440 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.2■□□□□ 0.34
PUDP-206ENST00000540122 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 BMP2KQ9NSY1 1161 aaPredicted RBP17.2■□□□□ 0.34
PUDP-206ENST00000540122 PARP2Q9UGN5 583 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 CDY1Q9Y6F8 540 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 ASH1LQ9NR48 2969 aaKnown RBP17.2■□□□□ 0.34
PUDP-206ENST00000540122 ITPR1Q14643 2758 aa17.2■□□□□ 0.34
PUDP-206ENST00000540122 LAMA5O15230 3695 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 ARHGEF37A1IGU5 675 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 SLC38A8A6NNN8 435 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 SGSM2O43147 1006 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 EXTL3O43909 919 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 MICAL2O94851 1124 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 LRG1P02750 347 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 CEACAM1P13688 526 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 PSMC5P62195 406 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 SPIRE1Q08AE8 756 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 NCBP1Q09161 790 aaKnown RBP17.19■□□□□ 0.34
PUDP-206ENST00000540122 ELAVL2Q12926 359 aaKnown RBP17.19■□□□□ 0.34
PUDP-206ENST00000540122 KIAA1211LQ6NV74 962 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 TXNDC11Q6PKC3 985 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 CSGALNACT1Q8TDX6 532 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 ZC3H10Q96K80 434 aaKnown RBP17.19■□□□□ 0.34
PUDP-206ENST00000540122 CEP170P1Q96L14 293 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 NEUROG3Q9Y4Z2 214 aa17.19■□□□□ 0.34
PUDP-206ENST00000540122 CCDC163A0A0D9SF12 145 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 INO80B-WBP1J3KQ70 363 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 ZNF197O14709 1029 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 ARF4P18085 180 aaPredicted RBP17.18■□□□□ 0.34
PUDP-206ENST00000540122 CSRP1P21291 193 aaKnown RBP17.18■□□□□ 0.34
PUDP-206ENST00000540122 FGFR3P22607 806 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 KPNA1P52294 538 aaPredicted RBP17.18■□□□□ 0.34
PUDP-206ENST00000540122 PTENP60484 403 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 AMHR2Q16671 573 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 PDZD4Q76G19 769 aaPredicted RBP17.18■□□□□ 0.34
PUDP-206ENST00000540122 MFSD6LQ8IWD5 586 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 C8orf33Q9H7E9 229 aaPredicted RBP17.18■□□□□ 0.34
PUDP-206ENST00000540122 BRPF3Q9ULD4 1205 aa17.18■□□□□ 0.34
PUDP-206ENST00000540122 FREM2Q5SZK8 3169 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 MYBPHLA2RUH7 354 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 SPECC1L-ADORA2AF8WAN1 911 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 ASAP2O43150 1006 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 ZBTB43O43298 467 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 AKAP3O75969 853 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 NPTXRO95502 500 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 RFC5P40937 340 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 CCINQ13939 588 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 CDR2LQ86X02 465 aaPredicted RBP17.17■□□□□ 0.34
PUDP-206ENST00000540122 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
PUDP-206ENST00000540122 TCP11Q8WWU5 503 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 TRPV4Q9HBA0 871 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 PPME1Q9Y570 386 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 BACE2Q9Y5Z0 518 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 VWA8A3KMH1 1905 aa17.17■□□□□ 0.34
PUDP-206ENST00000540122 LNP1A1A4G5 178 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 GOLGA8AA7E2F4 631 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 GOLGA8BA8MQT2 603 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 HEPACAM2A8MVW5 462 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 B4GALT5O43286 388 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 HYAL3O43820 417 aaPredicted RBP17.16■□□□□ 0.34
PUDP-206ENST00000540122 MOSPD3O75425 235 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 GNA11P29992 359 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 CTHP32929 405 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 USP11P51784 963 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 MBTD1Q05BQ5 628 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 EMC2Q15006 297 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 PLK5Q496M5 336 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 SLC27A1Q6PCB7 646 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 PDZD3Q86UT5 571 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 CCDC12Q8WUD4 166 aaPredicted RBP17.16■□□□□ 0.34
PUDP-206ENST00000540122 SPAG17Q6Q759 2223 aa17.16■□□□□ 0.34
PUDP-206ENST00000540122 PRRG1O14668 218 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 PTGESO14684 152 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 CDC27P30260 824 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 PON2Q15165 354 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 Q4G0T1 1027 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 CYP4A22Q5TCH4 519 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 PKN3Q6P5Z2 889 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 C19orf48Q6RUI8 117 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 RALGPS2Q86X27 583 aaPredicted RBP17.15■□□□□ 0.34
PUDP-206ENST00000540122 IFNLR1Q8IU57 520 aaPredicted RBP17.15■□□□□ 0.34
PUDP-206ENST00000540122 YAF2Q8IY57 180 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 SYNPOQ8N3V7 929 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 FAM200AQ8TCP9 573 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 RSPRY1Q96DX4 576 aa17.15■□□□□ 0.34
PUDP-206ENST00000540122 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
PUDP-206ENST00000540122 WRAP73Q9P2S5 460 aaPredicted RBP17.15■□□□□ 0.34
PUDP-206ENST00000540122 KLK13Q9UKR3 277 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms