RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 CPB2Q96IY4 423 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 FAM193BQ96PV7 902 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-212ENST00000539975 RAD9AQ99638 391 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 KIFC3Q9BVG8 833 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 CCDC94Q9BW85 323 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-212ENST00000539975 BLZF1Q9H2G9 400 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 FZD8Q9H461 694 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 ELAC1Q9H777 363 aaKnown RBP7.08□□□□□ -1.28
SNHG1-212ENST00000539975 OLFML3Q9NRN5 406 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 TOPORSQ9NS56 1045 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-212ENST00000539975 FAM105AQ9NUU6 356 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 TBC1D7Q9P0N9 293 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 ARHGAP28Q9P2N2 729 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 KANSL3Q9P2N6 904 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 TBX20Q9UMR3 447 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 PCDHB2Q9Y5E7 798 aa7.08□□□□□ -1.28
SNHG1-212ENST00000539975 CNTNAP2Q9UHC6 1331 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 A0A1B0GUA9 196 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 GJB5O95377 273 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 LDHAP00338 332 aaKnown RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 RPN1P04843 607 aaKnown RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 ARF4P18085 180 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 NMT1P30419 496 aaKnown RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 PPP1R2P41236 205 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 CLDN10P78369 228 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 SMAD3P84022 425 aaKnown RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 GTF2BQ00403 316 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 COASYQ13057 564 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 BTG3Q14201 252 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 BMS1Q14692 1282 aaKnown RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 GPNMBQ14956 572 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 LRIT3Q3SXY7 679 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF568Q3ZCX4 644 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 MPZL3Q6UWV2 235 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 ELOA2Q8IYF1 753 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 DAW1Q8N136 415 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 FIBCD1Q8N539 461 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.07□□□□□ -1.282e-85■□□□□ 9.7
SNHG1-212ENST00000539975 TMEM161BQ8NDZ6 487 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 GOLGA5Q8TBA6 731 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 NOC3LQ8WTT2 800 aaKnown RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 BSNDQ8WZ55 320 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 GSDMAQ96QA5 445 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 RPS6KC1Q96S38 1066 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 GAS2L1Q99501 681 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 TRAIPQ9BWF2 469 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 APOL6Q9BWW8 343 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 MRPL9Q9BYD2 267 aaKnown RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 GOLPH3LQ9H4A5 285 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 ST6GALNAC4Q9H4F1 302 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 MINDY3Q9H8M7 445 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 VRTNQ9H8Y1 702 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 CXXC1Q9P0U4 656 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 SCHIP1Q9P0W5 487 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 ANKFY1Q9P2R3 1169 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 PARP2Q9UGN5 583 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 TNFSF13BQ9Y275 285 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 R3HCC1Q9Y3T6 440 aaKnown RBP7.07□□□□□ -1.28
SNHG1-212ENST00000539975 RWDD3Q9Y3V2 267 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 PCDHA11Q9Y5I1 949 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 DOCK5Q9H7D0 1870 aa7.07□□□□□ -1.28
SNHG1-212ENST00000539975 CDC14CA4D256 554 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 TBKBP1A7MCY6 615 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 C9IYK1 514 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 KIAA0391O15091 583 aaKnown RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 EIF3DO15371 548 aaKnown RBP eCLIP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 B4GALT5O43286 388 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 ZNF623O75123 536 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 GADD45BO75293 160 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 NPTXRO95502 500 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 MCF2P10911 925 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 HARSP12081 509 aaKnown RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 ALDH7A1P49419 539 aaKnown RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 SNRPFP62306 86 aaKnown RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 FAM189BP81408 668 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 DEFB103AP81534 67 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 MAPK7Q13164 816 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 SNW1Q13573 536 aaKnown RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 KCNB1Q14721 858 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 NOLC1Q14978 699 aaKnown RBP eCLIP7.06□□□□□ -1.286e-9■■■■■ 28.9
SNHG1-212ENST00000539975 ZC2HC1CQ53FD0 456 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 RIPOR1Q6ZS17 1223 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 USP37Q86T82 979 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 ECHDC2Q86YB7 292 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 GRAMD1CQ8IYS0 662 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 PGBD3Q8N328 593 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 ENGASEQ8NFI3 743 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 POMGNT1Q8WZA1 660 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 DNAJC19Q96DA6 116 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 ACAP3Q96P50 834 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 ACO2Q99798 780 aaKnown RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 TSG101Q99816 390 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 MSTO1Q9BUK6 570 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 TARS2Q9BW92 718 aaKnown RBP7.06□□□□□ -1.28
SNHG1-212ENST00000539975 TMEM117Q9H0C3 514 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 CCDC113Q9H0I3 377 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 GBP3Q9H0R5 595 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 NUP62CLQ9H1M0 184 aa7.06□□□□□ -1.28
SNHG1-212ENST00000539975 TMX1Q9H3N1 280 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms