RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 SMG8Q8ND04 991 aaKnown RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 MYRIPQ8NFW9 859 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 TCP11Q8WWU5 503 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 PRPF31Q8WWY3 499 aaKnown RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 PSPC1Q8WXF1 523 aaKnown RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 SLC7A3Q8WY07 619 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 LENG9Q96B70 501 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 CCDC51Q96ER9 411 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 NLRP4Q96MN2 994 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 GAD1Q99259 594 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 LRRC2Q9BYS8 371 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 GPR62Q9BZJ7 368 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 PRMT8Q9NR22 394 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 SH2B1Q9NRF2 756 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-219ENST00000539952 SEMA4GQ9NTN9 838 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 MIOSQ9NXC5 875 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 GDE1Q9NZC3 331 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 TMEM63CQ9P1W3 806 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 USP25Q9UHP3 1055 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 ADAM28Q9UKQ2 775 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 ZDHHC9Q9Y397 364 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 COL4A3BPQ9Y5P4 624 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 LAMA4Q16363 1823 aa6.61□□□□□ -1.35
CPSF7-219ENST00000539952 FLNBO75369 2602 aaKnown RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 SYCE3A1L190 88 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 GOLGA8AA7E2F4 631 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 GOLGA8BA8MQT2 603 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 CHMP2AO43633 222 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 ERLIN2O94905 339 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 PTPN2P17706 415 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 TARSP26639 723 aaKnown RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 ADD1P35611 737 aaKnown RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 RFC5P40937 340 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 CXCL12P48061 93 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 CCR3P51677 355 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 MLLT6P55198 1093 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 UBE2HP62256 183 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 SHC2P98077 582 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 AKAP17AQ02040 695 aaKnown RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 ELAVL2Q12926 359 aaKnown RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 MTAPQ13126 283 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 MXD4Q14582 209 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 UGCGQ16739 394 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 DNTTIP2Q5QJE6 756 aaKnown RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 CREB3L3Q68CJ9 461 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 IL31Q6EBC2 164 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 NOTUMQ6P988 496 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 TSSK4Q6SA08 328 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 TPRG1Q6ZUI0 275 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 GLYCTKQ8IVS8 523 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 DNASE1L2Q92874 299 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 CLSTN3Q9BQT9 956 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 TTPALQ9BTX7 342 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 TRIM6Q9C030 488 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 LSG1Q9H089 658 aaKnown RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 CSRNP2Q9H175 543 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 CHRDQ9H2X0 955 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 UNC45AQ9H3U1 944 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 LMAN1LQ9HAT1 526 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 PARD6AQ9NPB6 346 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 FBXW11Q9UKB1 542 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 POLIQ9UNA4 740 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 IPPQ9Y573 584 aa6.6□□□□□ -1.35
CPSF7-219ENST00000539952 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.6□□□□□ -1.35
CPSF7-219ENST00000539952 DOCK8Q8NF50 2099 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CYP3A7-CYP3A51PA0A087WV96 503 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 MICAL2O94851 1124 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CAVIN2O95810 425 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 P4HBP07237 508 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 C8AP07357 584 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 HMGB1P09429 215 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 RPL17P18621 184 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CYP3A7P24462 503 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CDC27P30260 824 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 HSPA4P34932 840 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 MLH1P40692 756 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 QARSP47897 775 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 SCNN1GP51170 649 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 LIMK1P53667 647 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 PTENP60484 403 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 SPIRE1Q08AE8 756 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 LAMTOR4Q0VGL1 99 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 RAB33AQ14088 237 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 TFDP1Q14186 410 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 SIM2Q14190 667 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 NOLC1Q14978 699 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 SYCP1Q15431 976 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 TSGA10IPQ3SY00 556 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 PABPC1LQ4VXU2 614 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 AXDND1Q5T1B0 1012 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 SWT1Q5T5J6 900 aaKnown RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 N4BP2L1Q5TBK1 243 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-219ENST00000539952 C1orf228Q6PIY5 440 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 MOXD1Q6UVY6 613 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 B3GNT9Q6UX72 402 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 PRR23CQ6ZRP0 262 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 PRR23BQ6ZRT6 265 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 ANO5Q75V66 913 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 FERMT3Q86UX7 667 aa6.59□□□□□ -1.35
CPSF7-219ENST00000539952 CEP57Q86XR8 500 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms