RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PCDHB18PQ96TA0 734 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 ARHGAP39Q9C0H5 1083 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 AP5M1Q9H0R1 490 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 PCDHGC5Q9Y5F6 944 aa24.16■■□□□ 1.46
HOMER3-204ENST00000539827 CTAGE15A4D2H0 777 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 KIF3CO14782 793 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 F2P00734 622 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 CTAGE8P0CG41 777 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 MFSD10Q14728 455 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 ENOSF1Q7L5Y1 443 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 CTAGE6Q86UF2 777 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 CTAGE4Q8IX94 777 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 SMC1BQ8NDV3 1235 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 MMS19Q96T76 1030 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 PSMB7Q99436 277 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 TLR10Q9BXR5 811 aa24.15■■□□□ 1.46
HOMER3-204ENST00000539827 FAM49AQ9H0Q0 323 aaPredicted RBP24.15■■□□□ 1.46
HOMER3-204ENST00000539827 MMEP08473 750 aa24.14■■□□□ 1.46
HOMER3-204ENST00000539827 NCOA4Q13772 614 aa24.14■■□□□ 1.46
HOMER3-204ENST00000539827 MTMR12Q9C0I1 747 aa24.14■■□□□ 1.46
HOMER3-204ENST00000539827 HYOU1Q9Y4L1 999 aa24.14■■□□□ 1.46
HOMER3-204ENST00000539827 UMODL1Q5DID0 1318 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 TBC1D8O95759 1140 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 CST3P01034 146 aaPredicted RBP24.14■■□□□ 1.45
HOMER3-204ENST00000539827 IGHA2P01877 340 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 TMEM253P0C7T8 217 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 CYP11B1P15538 503 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 PSEN2P49810 448 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 TMEM62Q0P6H9 643 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 SURF1Q15526 300 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 FAM81BQ96LP2 452 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 OSBPL9Q96SU4 736 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 PDZD7Q9H5P4 517 aa24.14■■□□□ 1.45
HOMER3-204ENST00000539827 ARF4P18085 180 aaPredicted RBP24.13■■□□□ 1.45
HOMER3-204ENST00000539827 FGFR4P22455 802 aa24.13■■□□□ 1.45
HOMER3-204ENST00000539827 AP3M2P53677 418 aa24.13■■□□□ 1.45
HOMER3-204ENST00000539827 TFAMQ00059 246 aaKnown RBP24.13■■□□□ 1.45
HOMER3-204ENST00000539827 FMO1Q01740 532 aa24.13■■□□□ 1.45
HOMER3-204ENST00000539827 CAGE1Q8TC20 777 aa24.13■■□□□ 1.45
HOMER3-204ENST00000539827 COG1Q8WTW3 980 aa24.13■■□□□ 1.45
HOMER3-204ENST00000539827 ARHGEF26Q96DR7 871 aa24.13■■□□□ 1.45
HOMER3-204ENST00000539827 RPF1Q9H9Y2 349 aaKnown RBP24.13■■□□□ 1.45
HOMER3-204ENST00000539827 NUB1Q9Y5A7 615 aa24.13■■□□□ 1.45
HOMER3-204ENST00000539827 A0A0A6YYK5 440 aaPredicted RBP24.12■■□□□ 1.45
HOMER3-204ENST00000539827 CXCL8P10145 99 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 CXCR5P32302 372 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 PSMC4P43686 418 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 PDE6CP51160 858 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 DNA2P51530 1060 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 HIC1Q14526 733 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 IFI16Q16666 785 aaKnown RBP24.12■■□□□ 1.45
HOMER3-204ENST00000539827 KIZQ2M2Z5 673 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 PDCL2Q8N4E4 241 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 TRPV1Q8NER1 839 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 TPCN2Q8NHX9 752 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 CTNNBL1Q8WYA6 563 aaPredicted RBP24.12■■□□□ 1.45
HOMER3-204ENST00000539827 THAP2Q9H0W7 228 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 GOLPH3Q9H4A6 298 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 GABRQQ9UN88 632 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 PACSIN2Q9UNF0 486 aaPredicted RBP24.12■■□□□ 1.45
HOMER3-204ENST00000539827 MGAMO43451 1857 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 PDE2AO00408 941 aaPredicted RBP24.12■■□□□ 1.45
HOMER3-204ENST00000539827 FTLP02792 175 aaPredicted RBP24.12■■□□□ 1.45
HOMER3-204ENST00000539827 CLTAP09496 248 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 CPT1AP50416 773 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 NOP14P78316 857 aaKnown RBP24.12■■□□□ 1.45
HOMER3-204ENST00000539827 CUL2Q13617 745 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 DUOXA2Q1HG44 320 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 MEI1Q5TIA1 1274 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 EFCAB13Q8IY85 973 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 RABGGTAQ92696 567 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 GINS2Q9Y248 185 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 NCANO14594 1321 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 NRCAMQ92823 1304 aa24.12■■□□□ 1.45
HOMER3-204ENST00000539827 STAG3L1P0CL83 205 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 MCF2P10911 925 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 CYP2C9P11712 490 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 PRLRP16471 622 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 FCGRTP55899 365 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 RUFY4Q6ZNE9 571 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 OSGEPQ9NPF4 335 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 ANKRD62A6NC57 917 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 TSPAN1O60635 241 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 TMEM191BP0C7N4 346 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 ZSCAN20P17040 1043 aaPredicted RBP24.11■■□□□ 1.45
HOMER3-204ENST00000539827 TCP1P17987 556 aaKnown RBP24.11■■□□□ 1.45
HOMER3-204ENST00000539827 MYL6P60660 151 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 CDR2Q01850 454 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 CKAP4Q07065 602 aaKnown RBP24.11■■□□□ 1.45
HOMER3-204ENST00000539827 PTPROQ16827 1216 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 FBXO38Q6PIJ6 1188 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 ZNF410Q86VK4 478 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 SLC35G2Q8TBE7 412 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 DDX1Q92499 740 aaKnown RBP24.11■■□□□ 1.45
HOMER3-204ENST00000539827 ISCUQ9H1K1 167 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 Q9Y3F1 56 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 PCDHB4Q9Y5E5 795 aa24.11■■□□□ 1.45
HOMER3-204ENST00000539827 RTN2O75298 545 aa24.1■■□□□ 1.45
HOMER3-204ENST00000539827 ERLIN2O94905 339 aa24.1■■□□□ 1.45
HOMER3-204ENST00000539827 ACO1P21399 889 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms