RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 YME1L1Q96TA2 773 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 SAMSN1Q9NSI8 373 aaKnown RBP16.72■□□□□ 0.27
DDB1-216ENST00000539739 RNF19AQ9NV58 838 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 DERAQ9Y315 318 aa16.72■□□□□ 0.27
DDB1-216ENST00000539739 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.72■□□□□ 0.27
DDB1-216ENST00000539739 SMIM28A0A1B0GU29 152 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 TNNI1P19237 187 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 CDK11BP21127 795 aaKnown RBP16.71■□□□□ 0.27
DDB1-216ENST00000539739 SCNN1GP51170 649 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 MARSP56192 900 aaKnown RBP16.71■□□□□ 0.27
DDB1-216ENST00000539739 RNASELQ05823 741 aaKnown RBP16.71■□□□□ 0.27
DDB1-216ENST00000539739 TMEM132DQ14C87 1099 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 TCERG1LQ5VWI1 586 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 JADE1Q6IE81 842 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 TMCO2Q7Z6W1 182 aaPredicted RBP16.71■□□□□ 0.27
DDB1-216ENST00000539739 LUZP1Q86V48 1076 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 ANKRD20A12PQ8NF67 263 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 BORCS6Q96GS4 357 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 CGRRF1Q99675 332 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 SLC38A7Q9NVC3 462 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 C2CD2Q9Y426 696 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 INSL6Q9Y581 213 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 CITO14578 2027 aa16.71■□□□□ 0.27
DDB1-216ENST00000539739 KCNJ18B7U540 433 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 MEFVO15553 781 aaPredicted RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 STX10O60499 249 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 POMCP01189 267 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 EEF1GP26641 437 aaKnown RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 MTIF2P46199 727 aaKnown RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 SPAG1Q07617 926 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 GRIK3Q13003 919 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 KCNJ12Q14500 433 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 HSP90AA4PQ58FG1 418 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 GLRA4Q5JXX5 417 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 IRF2BP1Q8IU81 584 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 WDR49Q8IV35 697 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 TDHQ8IZJ6 230 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 ZNF689Q96CS4 500 aaPredicted RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 TRIM44Q96DX7 344 aaPredicted RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 ANKRD36BP1Q96IX9 119 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 FAM193BQ96PV7 902 aaPredicted RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 RAD9AQ99638 391 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 UBQLN1Q9UMX0 589 aaKnown RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 PTGESO14684 152 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 TLL1O43897 1013 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 TMEM191BP0C7N4 346 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 GATMP50440 423 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 AFF1P51825 1210 aaKnown RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 AP3M2P53677 418 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 TFAMQ00059 246 aaKnown RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 DUOXA2Q1HG44 320 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 PAN2Q504Q3 1202 aaKnown RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 DCAF17Q5H9S7 520 aaPredicted RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 CDKAL1Q5VV42 579 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 CMTR2Q8IYT2 770 aaKnown RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 LRRC43Q8N309 656 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 GSTCDQ8NEC7 633 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 BEST2Q8NFU1 509 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 ZMAT2Q96NC0 199 aaKnown RBP16.7■□□□□ 0.26
DDB1-216ENST00000539739 TBC1D13Q9NVG8 400 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 MIOSQ9NXC5 875 aa16.7■□□□□ 0.26
DDB1-216ENST00000539739 LRRIQ3A6PVS8 624 aaPredicted RBP16.69■□□□□ 0.26
DDB1-216ENST00000539739 TNNC2P02585 160 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 NFICP08651 508 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 WNT7BP56706 349 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 HTRA4P83105 476 aaPredicted RBP16.69■□□□□ 0.26
DDB1-216ENST00000539739 BTG3Q14201 252 aaPredicted RBP16.69■□□□□ 0.26
DDB1-216ENST00000539739 TCP11X2Q5H9J9 407 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 TRIM59Q8IWR1 403 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 RNF214Q8ND24 703 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 PLEKHO2Q8TD55 490 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 PPP1R10Q96QC0 940 aaKnown RBP16.69■□□□□ 0.26
DDB1-216ENST00000539739 POP1Q99575 1024 aaKnown RBP16.69■□□□□ 0.26
DDB1-216ENST00000539739 CXCL16Q9H2A7 254 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
DDB1-216ENST00000539739 BCCIPQ9P287 314 aaKnown RBP eCLIP16.69■□□□□ 0.26
DDB1-216ENST00000539739 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.69■□□□□ 0.26
DDB1-216ENST00000539739 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.68■□□□□ 0.26
DDB1-216ENST00000539739 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.68■□□□□ 0.26
DDB1-216ENST00000539739 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
DDB1-216ENST00000539739 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
DDB1-216ENST00000539739 CYP3A5P20815 502 aa16.68■□□□□ 0.26
DDB1-216ENST00000539739 GTF2H1P32780 548 aa16.68■□□□□ 0.26
DDB1-216ENST00000539739 MCCD1P59942 119 aaPredicted RBP16.68■□□□□ 0.26
DDB1-216ENST00000539739 DLG4P78352 724 aa16.68■□□□□ 0.26
DDB1-216ENST00000539739 CLDN10P78369 228 aa16.68■□□□□ 0.26
DDB1-216ENST00000539739 LMBRD2Q68DH5 695 aaPredicted RBP16.68■□□□□ 0.26
DDB1-216ENST00000539739 EFCAB13Q8IY85 973 aa16.68■□□□□ 0.26
DDB1-216ENST00000539739 RC3H2Q9HBD1 1191 aaKnown RBP16.68■□□□□ 0.26
DDB1-216ENST00000539739 PLAGL2Q9UPG8 496 aa16.68■□□□□ 0.26
DDB1-216ENST00000539739 R3HCC1Q9Y3T6 440 aaKnown RBP16.68■□□□□ 0.26
DDB1-216ENST00000539739 TNRC18O15417 2968 aaPredicted RBP16.68■□□□□ 0.26
DDB1-216ENST00000539739 ZNF18P17022 549 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 TUSC3Q13454 348 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 ZBTB6Q15916 424 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 SPOUT1Q5T280 376 aaKnown RBP16.67■□□□□ 0.26
DDB1-216ENST00000539739 HOMEZQ8IX15 550 aa16.67■□□□□ 0.26
DDB1-216ENST00000539739 FIBCD1Q8N539 461 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms