RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 HES6Q96HZ4 224 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 KREMEN1Q96MU8 473 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 CARD9Q9H257 536 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 ABCB6Q9NP58 842 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 FAM53CQ9NYF3 392 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 GTF3C4Q9UKN8 822 aa10.92□□□□□ -0.66
SPARC-209ENST00000539687 CNTNAP2Q9UHC6 1331 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 ZBTB42B2RXF5 422 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 KCNK3O14649 394 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 ZNF185O15231 689 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 CYP26A1O43174 497 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 B4GALT4O60513 344 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 CLTAP09496 248 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 SRGAP2CP0DJJ0 459 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 MCF2P10911 925 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 PROZP22891 400 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 ACOT2P49753 483 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 C2orf54Q08AI8 447 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 TRPC3Q13507 836 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 CUL2Q13617 745 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 NCOA4Q13772 614 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 DGKDQ16760 1214 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 ZNF568Q3ZCX4 644 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 BEND6Q5SZJ8 279 aaPredicted RBP10.91□□□□□ -0.66
SPARC-209ENST00000539687 TDRD10Q5VZ19 366 aaKnown RBP10.91□□□□□ -0.66
SPARC-209ENST00000539687 ACAD10Q6JQN1 1059 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 CRELD2Q6UXH1 353 aaPredicted RBP10.91□□□□□ -0.66
SPARC-209ENST00000539687 NOP9Q86U38 636 aaKnown RBP10.91□□□□□ -0.66
SPARC-209ENST00000539687 NT5DC3Q86UY8 548 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 ZNF410Q86VK4 478 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 NT5DC4Q86YG4 428 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 CD302Q8IX05 232 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 RASGEF1CQ8N431 466 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 TTC39CQ8N584 583 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 SOCS4Q8WXH5 440 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 ANKRD36BP1Q96IX9 119 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 VCPIP1Q96JH7 1222 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 MAML3Q96JK9 1138 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 RUNDC3BQ96NL0 473 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 POP1Q99575 1024 aaKnown RBP10.91□□□□□ -0.66
SPARC-209ENST00000539687 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.91□□□□□ -0.66
SPARC-209ENST00000539687 TINF2Q9BSI4 451 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 WNT8AQ9H1J5 351 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 PDE11AQ9HCR9 933 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 AVENQ9NQS1 362 aaPredicted RBP10.91□□□□□ -0.66
SPARC-209ENST00000539687 ZNF446Q9NWS9 450 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 CTTNBP2NLQ9P2B4 639 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 CPSF3Q9UKF6 684 aaKnown RBP10.91□□□□□ -0.66
SPARC-209ENST00000539687 CNTN6Q9UQ52 1028 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 STXBP5LQ9Y2K9 1186 aa10.91□□□□□ -0.66
SPARC-209ENST00000539687 CCDC66A2RUB6 948 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 H3BRB1 525 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 INO80B-WBP1J3KQ70 363 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 PDE2AO00408 941 aaPredicted RBP10.9□□□□□ -0.66
SPARC-209ENST00000539687 NCK2O43639 380 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 SGPL1O95470 568 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 CYP1A2P05177 515 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 TMEM191BP0C7N4 346 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 INSRRP14616 1297 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 ABCB4P21439 1286 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 SLC1A1P43005 524 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 VSNL1P62760 191 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 NOP14P78316 857 aaKnown RBP10.9□□□□□ -0.66
SPARC-209ENST00000539687 FMO1Q01740 532 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 MBTD1Q05BQ5 628 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 GABPB1Q06547 395 aaPredicted RBP10.9□□□□□ -0.66
SPARC-209ENST00000539687 NNTQ13423 1086 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 ACVR2BQ13705 512 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 CLEC16AQ2KHT3 1053 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 LIN9Q5TKA1 542 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 EMBQ6PCB8 327 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 MAATS1Q7Z4T9 603 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 TRIM50Q86XT4 487 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 METTL13Q8N6R0 699 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 GOLGA6L1Q8N7Z2 621 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 USP38Q8NB14 1042 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 ZSWIM2Q8NEG5 633 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 OR6J1Q8NGC5 347 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 CCDC26Q8TAB7 109 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 OLIG1Q8TAK6 271 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 NLRP4Q96MN2 994 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 PHF12Q96QT6 1004 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 PNKPQ96T60 521 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 ADPGKQ9BRR6 497 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 INO80BQ9C086 356 aaPredicted RBP10.9□□□□□ -0.66
SPARC-209ENST00000539687 KATNBL1Q9H079 304 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 THAP2Q9H0W7 228 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 SLITRK6Q9H5Y7 841 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 ASB7Q9H672 318 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 TUT1Q9H6E5 874 aaKnown RBP10.9□□□□□ -0.66
SPARC-209ENST00000539687 RPF1Q9H9Y2 349 aaKnown RBP10.9□□□□□ -0.66
SPARC-209ENST00000539687 MRPL47Q9HD33 250 aaKnown RBP10.9□□□□□ -0.66
SPARC-209ENST00000539687 PTPRHQ9HD43 1115 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 PDGFCQ9NRA1 345 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 TOPORSQ9NS56 1045 aaPredicted RBP10.9□□□□□ -0.66
SPARC-209ENST00000539687 STIM2Q9P246 746 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 Q9Y3F1 56 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 CEP83Q9Y592 693 aa10.9□□□□□ -0.66
SPARC-209ENST00000539687 PLXNA1Q9UIW2 1896 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms