RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 FBXW4P57775 412 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 NCOA4Q13772 614 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 RGS9BPQ6ZS82 235 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 RNF135Q8IUD6 432 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ZBED8Q8IZ13 594 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 RIBC1Q8N443 379 aaPredicted RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 RDM1Q8NG50 284 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 RAET1EQ8TD07 263 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 KIF2CQ99661 725 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 PIN4Q9Y237 131 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 CASZ1Q86V15 1759 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ERCC6L2Q5T890 1561 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 CYP26A1O43174 497 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 CSF1RP07333 972 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ITIH2P19823 946 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 FXR2P51116 673 aaKnown RBP eCLIP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 MTMR2Q13614 643 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ZBTB41Q5SVQ8 909 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ZC3H18Q86VM9 953 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 YAF2Q8IY57 180 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 SLC35G2Q8TBE7 412 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 SMAPO00193 183 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 PDHBP11177 359 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 IL10P22301 178 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 MAP4P27816 1152 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 MAP3K10Q02779 954 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 PATL1Q86TB9 770 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 STKLD1Q8NE28 680 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 SPON2Q9BUD6 331 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 COG4Q9H9E3 785 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 GPBP1L1Q9HC44 474 aaPredicted RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 TMEM8AQ9HCN3 771 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ZC3H4Q9UPT8 1303 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 A0A1B0GTH6 734 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 RRN3P2A6NIE6 340 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 PP2D1A8MPX8 630 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 HDAC4P56524 1084 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 GTF2H3Q13889 308 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 UGP2Q16851 508 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 FASTKD1Q53R41 847 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 SEPT1Q8WYJ6 367 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 CATSPERBQ9H7T0 1116 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 PLEKHA5Q9HAU0 1116 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 RGL1Q9NZL6 768 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 CNOT7Q9UIV1 285 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 LSM7Q9UK45 103 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 PITPNM2Q9BZ72 1349 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 C3orf70A6NLC5 250 aaPredicted RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 TNPO2O14787 897 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 P4HA2O15460 535 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 TLR2O60603 784 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 EFCAB14O75071 495 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ACTR2P61160 394 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 SCARF1Q14162 830 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 NR1I3Q14994 352 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 LCA5Q86VQ0 697 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 OTUB1Q96FW1 271 aaPredicted RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 SIK2Q9H0K1 926 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ANKEF1Q9NU02 776 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 MUTP22033 750 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 EDRF1Q3B7T1 1238 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 RARS2Q5T160 578 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 NLRP14Q86W24 1093 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 TTC30AQ86WT1 665 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 NAF1Q96HR8 494 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 WWP1Q9H0M0 922 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 C17orf75Q9HAS0 396 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 PPLO60437 1756 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 KBTBD13C9JR72 458 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ATP1A1P05023 1023 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 NMT1P30419 496 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 SERPINB4P48594 390 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 MMP14P50281 582 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 VPS72Q15906 364 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 LRIG3Q6UXM1 1119 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 FAM47EQ6ZV65 393 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ANKS3Q6ZW76 656 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 ZNF34Q8IZ26 560 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 CCNYL1Q8N7R7 359 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 OR9Q1Q8NGQ5 310 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 C1orf54Q8WWF1 131 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 CMTM5Q96DZ9 223 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 MXRA8Q9BRK3 442 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 DDX47Q9H0S4 455 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 VCPKMTQ9H867 229 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 XPO7Q9UIA9 1087 aaKnown RBP6.83□□□□□ -1.32
LSAMP-207ENST00000539563 AGAP1Q9UPQ3 857 aa6.83□□□□□ -1.32
LSAMP-207ENST00000539563 NCK2O43639 380 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 SPAG6O75602 509 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 NAB2Q15742 525 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 RMDN1Q96DB5 314 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 VIPAS39Q9H9C1 493 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 IGSF9BQ9UPX0 1349 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 NPHP3-ACAD11A0A0J9YXS1 232 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 HBP1O60381 514 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 NDUFB10O96000 172 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 AGTP01019 485 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 HMOX2P30519 316 aa6.82□□□□□ -1.32
LSAMP-207ENST00000539563 POLE2P56282 527 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms