RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 TNFRSF25Q93038 417 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 BIRC8Q96P09 236 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NUDCD1Q96RS6 583 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 MKNK2Q9HBH9 465 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 USP29Q9HBJ7 922 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 AASDHPPTQ9NRN7 309 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ABHD10Q9NUJ1 306 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TXLNGQ9NUQ3 528 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ZNF212Q9UDV6 495 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ADD3Q9UEY8 706 aaKnown RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ACAD8Q9UKU7 415 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TRIM17Q9Y577 477 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 FAM205AQ6ZU69 1335 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 hCG_2014768A0A024R1R8 64 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PVALEFA0A1B0GWK0 134 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 USP17L3A6NCW0 530 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 USP17L4A6NCW7 530 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 CENPBD1B2RD01 187 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 HGSO14964 777 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 GYPCP04921 128 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 FAM153BP0C7A2 387 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TSPY3P0CV98 308 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TSPY8P0CW00 308 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PABPC1P11940 636 aaKnown RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ZNF12P17014 697 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TCP1P17987 556 aaKnown RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PRCPP42785 496 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 EPHA7Q15375 998 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 INSCQ1MX18 579 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 FAM153CQ494X1 144 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 USP17L1Q7RTZ2 530 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PNMA1Q8ND90 353 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 DDHD1Q8NEL9 900 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NRG4Q8WWG1 115 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NELFBQ8WX92 580 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 SCG3Q8WXD2 468 aaKnown RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ANKS1AQ92625 1134 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PRICKLE1Q96MT3 831 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ERP44Q9BS26 406 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PLGRKTQ9HBL7 147 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TCP11L1Q9NUJ3 509 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PLK2Q9NYY3 685 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 DNAJB4Q9UDY4 337 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 FAM153AQ9UHL3 310 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 KCNH3Q9ULD8 1083 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TMCC3Q9ULS5 477 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 SCAF8Q9UPN6 1271 aaKnown RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PCDHB4Q9Y5E5 795 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 MYH7BA7E2Y1 1941 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 BAIAP3O94812 1187 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NDUFA10O95299 355 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ALAS1P13196 640 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 HOXB1P14653 301 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 VEGFAP15692 232 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 BCAP31P51572 246 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 HERVK_113P62684 666 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 GTF2IP78347 998 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NIPAL4Q0D2K0 466 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 UAP1Q16222 522 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PHKG1Q16816 387 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PFKFB3Q16875 520 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 CDONQ4KMG0 1287 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TNFAIP8L3Q5GJ75 292 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TMTC4Q5T4D3 741 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 CDKAL1Q5VV42 579 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 SNX30Q5VWJ9 437 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ZNF772Q68DY9 489 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 KIAA1841Q6NSI8 718 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 C16orf86Q6ZW13 317 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ACAD11Q709F0 780 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 METTL16Q86W50 562 aaKnown RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ZNF444Q8N0Y2 327 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ALLCQ8N6M5 410 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 TOR1AIP2Q8NFQ8 470 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 GIMAP5Q96F15 307 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ZNF184Q99676 751 aaPredicted RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 COA1Q9GZY4 146 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ADAM7Q9H2U9 754 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 EMILIN3Q9NT22 766 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 MOCS1Q9NZB8 636 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 AIPL1Q9NZN9 384 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 DACH1Q9UI36 760 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 DNAJC16Q9Y2G8 782 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ARL2BPQ9Y2Y0 163 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 SRPRBQ9Y5M8 271 aaKnown RBP6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 SNED1Q8TER0 1413 aa6.12□□□□□ -1.43
RAB3GAP1-207ENST00000539493 MYH1P12882 1939 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 MYH6P13533 1939 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 A6NJR5 290 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NOTOA8MTQ0 251 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 E9PMD0 336 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 RIMBP2O15034 1052 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 HNRNPCL1O60812 293 aaKnown RBP6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 SRGAP2O75044 1071 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PEX14O75381 377 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 ZNF254O75437 659 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 MMP10P09238 476 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 NPR1P16066 1061 aa6.11□□□□□ -1.43
RAB3GAP1-207ENST00000539493 PLCG2P16885 1265 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms