RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-204ENST00000539463 FOXD4L3Q6VB84 417 aaPredicted RBP28.21■■■□□ 2.11
DENR-204ENST00000539463 CEP57Q86XR8 500 aa28.21■■■□□ 2.11
DENR-204ENST00000539463 FEZF2Q8TBJ5 459 aa28.21■■■□□ 2.11
DENR-204ENST00000539463 DNAJC19Q96DA6 116 aa28.21■■■□□ 2.11
DENR-204ENST00000539463 RIPOR3Q96MK2 946 aa28.21■■■□□ 2.11
DENR-204ENST00000539463 ST6GALNAC4Q9H4F1 302 aa28.21■■■□□ 2.11
DENR-204ENST00000539463 POMKQ9H5K3 350 aa28.21■■■□□ 2.11
DENR-204ENST00000539463 SFXN1Q9H9B4 322 aa28.21■■■□□ 2.11
DENR-204ENST00000539463 GLUD1P00367 558 aa28.2■■■□□ 2.1
DENR-204ENST00000539463 ABCD1P33897 745 aa28.2■■■□□ 2.1
DENR-204ENST00000539463 ZC2HC1CQ53FD0 456 aaPredicted RBP28.2■■■□□ 2.1
DENR-204ENST00000539463 ATAT1Q5SQI0 421 aa28.2■■■□□ 2.1
DENR-204ENST00000539463 SFR1Q86XK3 245 aa28.2■■■□□ 2.1
DENR-204ENST00000539463 PALB2Q86YC2 1186 aa28.2■■■□□ 2.1
DENR-204ENST00000539463 C11orf16Q9NQ32 467 aa28.2■■■□□ 2.1
DENR-204ENST00000539463 MAN1C1Q9NR34 630 aa28.2■■■□□ 2.1
DENR-204ENST00000539463 MUTYHQ9UIF7 546 aa28.2■■■□□ 2.1
DENR-204ENST00000539463 C1RP00736 705 aa28.19■■■□□ 2.1
DENR-204ENST00000539463 CLTAP09496 248 aa28.19■■■□□ 2.1
DENR-204ENST00000539463 RPL17P18621 184 aaKnown RBP28.19■■■□□ 2.1
DENR-204ENST00000539463 CREMQ03060 361 aa28.19■■■□□ 2.1
DENR-204ENST00000539463 MAP4K3Q8IVH8 894 aa28.19■■■□□ 2.1
DENR-204ENST00000539463 PDILTQ8N807 584 aa28.19■■■□□ 2.1
DENR-204ENST00000539463 C3orf58Q8NDZ4 430 aa28.19■■■□□ 2.1
DENR-204ENST00000539463 LNX1Q8TBB1 728 aaPredicted RBP28.19■■■□□ 2.1
DENR-204ENST00000539463 PIK3R5Q8WYR1 880 aa28.19■■■□□ 2.1
DENR-204ENST00000539463 C18orf25Q96B23 403 aaPredicted RBP28.19■■■□□ 2.1
DENR-204ENST00000539463 DDX27Q96GQ7 796 aaKnown RBP28.19■■■□□ 2.1
DENR-204ENST00000539463 SPDYE4A6NLX3 237 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 GPR37L1O60883 481 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 SPATA31D3P0C874 917 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 HERC4Q5GLZ8 1057 aaPredicted RBP28.18■■■□□ 2.1
DENR-204ENST00000539463 TMEM31Q5JXX7 168 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 SLC39A4Q6P5W5 647 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 LILRA6Q6PI73 481 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 SPATA31D4Q6ZUB0 917 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 ZNF720Q7Z2F6 126 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 GPR149Q86SP6 731 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 GLYCTKQ8IVS8 523 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 PLEKHA5Q9HAU0 1116 aa28.18■■■□□ 2.1
DENR-204ENST00000539463 TGM5O43548 720 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 FAM189A1O60320 539 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 CUTAO60888 179 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 CXCL8P10145 99 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 MYBP10242 640 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 GAP43P17677 238 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 FGFR3P22607 806 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 TNFSF9P41273 254 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.17■■■□□ 2.1
DENR-204ENST00000539463 CLSTN3Q9BQT9 956 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 SEL1LQ9UBV2 794 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 DPP7Q9UHL4 492 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 MYH15Q9Y2K3 1946 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 TRIP11Q15643 1979 aa28.17■■■□□ 2.1
DENR-204ENST00000539463 A0A0B4J269 797 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 TTC26A0AVF1 554 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 FAM86C2PA6NEL3 165 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 ANKRD63C9JTQ0 380 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 PODXLO00592 558 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 OGTO15294 1046 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 SP100P23497 879 aaPredicted RBP28.16■■■□□ 2.1
DENR-204ENST00000539463 RPL9P32969 192 aaKnown RBP28.16■■■□□ 2.1
DENR-204ENST00000539463 PSMD5Q16401 504 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 KYAT1Q16773 422 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 ZBTB41Q5SVQ8 909 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 ELMSAN1Q6PJG2 1045 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 SHC4Q6S5L8 630 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 CMASQ8NFW8 434 aaPredicted RBP28.16■■■□□ 2.1
DENR-204ENST00000539463 HDAC7Q8WUI4 952 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 LRFN3Q9BTN0 628 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 STRA6Q9BX79 667 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 TSHZ2Q9NRE2 1034 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 NR2E1Q9Y466 385 aa28.16■■■□□ 2.1
DENR-204ENST00000539463 I3L4J1 428 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 TRAPPC3O43617 180 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 PPP1R37O75864 691 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 BRCC3P46736 316 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 AXDND1Q5T1B0 1012 aaPredicted RBP28.15■■■□□ 2.1
DENR-204ENST00000539463 ATL3Q6DD88 541 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 PDXDC1Q6P996 788 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 C15orf39Q6ZRI6 1047 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 MSTO1Q9BUK6 570 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 PLEKHA4Q9H4M7 779 aa28.15■■■□□ 2.1
DENR-204ENST00000539463 MRPL44Q9H9J2 332 aaKnown RBP28.15■■■□□ 2.1
DENR-204ENST00000539463 TRIOO75962 3097 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 CCDC195A0A1B0GUA6 201 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 RFPL2O75678 378 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 SPAG1Q07617 926 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 ENOX2Q16206 610 aaKnown RBP28.14■■■□□ 2.1
DENR-204ENST00000539463 E2F4Q16254 413 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 KCNG4Q8TDN1 519 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 HVCN1Q96D96 273 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 TBC1D7Q9P0N9 293 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 TUBGCP4Q9UGJ1 667 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 PLXNA3P51805 1871 aa28.14■■■□□ 2.1
DENR-204ENST00000539463 FRMD3A2A2Y4 597 aa28.13■■■□□ 2.09
DENR-204ENST00000539463 LACTBL1A8MY62 500 aa28.13■■■□□ 2.09
DENR-204ENST00000539463 TISP43B9A030 160 aa28.13■■■□□ 2.09
DENR-204ENST00000539463 ADAM12O43184 909 aa28.13■■■□□ 2.09
DENR-204ENST00000539463 IDEP14735 1019 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms