RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 ZNF446Q9NWS9 450 aa27.45■■□□□ 1.99
KLHL42-202ENST00000539176 NAGPAQ9UK23 515 aa27.45■■□□□ 1.99
KLHL42-202ENST00000539176 NENFQ9UMX5 172 aa27.45■■□□□ 1.99
KLHL42-202ENST00000539176 PCDHGC5Q9Y5F6 944 aa27.45■■□□□ 1.99
KLHL42-202ENST00000539176 ABLIM1O14639 778 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 CLDN3O15551 220 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 ITIH3Q06033 890 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 ATF7IP2Q5U623 682 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 ZNF572Q7Z3I7 529 aaPredicted RBP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 CPB2Q96IY4 423 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 MFSD14AQ96MC6 490 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 HMX1Q9NP08 348 aaPredicted RBP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 GPR32O75388 356 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 TOM1L1O75674 476 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 ZRANB2O95218 330 aaKnown RBP eCLIP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 MYCP01106 439 aaPredicted RBP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 CST5P28325 142 aaPredicted RBP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 GCLMP48507 274 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 ENOX2Q16206 610 aaKnown RBP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 GDF6Q6KF10 455 aaPredicted RBP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 ALKBH5Q6P6C2 394 aaKnown RBP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 LMO3Q8TAP4 145 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 CAGE1Q8TC20 777 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 ARFGAP3Q9NP61 516 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 PRMT7Q9NVM4 692 aaPredicted RBP27.44■■□□□ 1.98
KLHL42-202ENST00000539176 WBP1LQ9NX94 342 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 SALL4Q9UJQ4 1053 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 FRMPD3Q5JV73 1810 aa27.44■■□□□ 1.98
KLHL42-202ENST00000539176 ZNF233A6NK53 670 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 LRRIQ3A6PVS8 624 aaPredicted RBP27.43■■□□□ 1.98
KLHL42-202ENST00000539176 EVI5O60447 810 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 DRAP1Q14919 205 aaPredicted RBP27.43■■□□□ 1.98
KLHL42-202ENST00000539176 EPC2Q52LR7 807 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 GJB7Q6PEY0 223 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 TSHZ1Q6ZSZ6 1077 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 PARD3BQ8TEW8 1205 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 HNRNPLLQ8WVV9 542 aaKnown RBP27.43■■□□□ 1.98
KLHL42-202ENST00000539176 OSMRQ99650 979 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 GTF2IRD1Q9UHL9 959 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 GRIN2DO15399 1336 aa27.43■■□□□ 1.98
KLHL42-202ENST00000539176 TFRCP02786 760 aaKnown RBP27.42■■□□□ 1.98
KLHL42-202ENST00000539176 TNFSF9P41273 254 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 NAP1L1P55209 391 aaKnown RBP27.42■■□□□ 1.98
KLHL42-202ENST00000539176 C1QTNF8P60827 252 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 LHX8Q68G74 356 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 CC2D1AQ6P1N0 951 aaPredicted RBP27.42■■□□□ 1.98
KLHL42-202ENST00000539176 ZNF410Q86VK4 478 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 DLATP10515 647 aaKnown RBP27.42■■□□□ 1.98
KLHL42-202ENST00000539176 GNAT1P11488 350 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 PROZP22891 400 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 MXI1P50539 228 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 FAM187BQ17R55 369 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 ZNF568Q3ZCX4 644 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 TMC2Q8TDI7 906 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 PTPRHQ9HD43 1115 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 RNF14Q9UBS8 474 aa27.42■■□□□ 1.98
KLHL42-202ENST00000539176 A0A0A6YYK5 440 aaPredicted RBP27.41■■□□□ 1.98
KLHL42-202ENST00000539176 FAM189A1O60320 539 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 SRGAP2O75044 1071 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 ERLIN1O75477 346 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 MCM3P25205 808 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 LMBRD2Q68DH5 695 aaPredicted RBP27.41■■□□□ 1.98
KLHL42-202ENST00000539176 MPZL3Q6UWV2 235 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 RNF180Q86T96 592 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 OSBPL9Q96SU4 736 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 MMS19Q96T76 1030 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 FAM53CQ9NYF3 392 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 CEP350Q5VT06 3117 aa27.41■■□□□ 1.98
KLHL42-202ENST00000539176 LRRN2O75325 713 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 ARF4P18085 180 aaPredicted RBP27.4■■□□□ 1.98
KLHL42-202ENST00000539176 GTF2H1P32780 548 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 MCL1Q07820 350 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 PCSK9Q8NBP7 692 aaKnown RBP27.4■■□□□ 1.98
KLHL42-202ENST00000539176 WNT8BQ93098 351 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 ARID3AQ99856 593 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 GPR88Q9GZN0 384 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 EPC1Q9H2F5 836 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 KIAA1586Q9HCI6 787 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 PDE11AQ9HCR9 933 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 CNTNAP2Q9UHC6 1331 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 KIAA0391O15091 583 aaKnown RBP27.4■■□□□ 1.98
KLHL42-202ENST00000539176 BUB1O43683 1085 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 TSPAN1O60635 241 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 CEP120Q8N960 986 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 CAPZA3Q96KX2 299 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 GCOM2Q9BZD3 368 aaPredicted RBP27.4■■□□□ 1.98
KLHL42-202ENST00000539176 TMEM117Q9H0C3 514 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 CDT1Q9H211 546 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 RBAKQ9NYW8 714 aaPredicted RBP27.4■■□□□ 1.98
KLHL42-202ENST00000539176 TNFSF13BQ9Y275 285 aa27.4■■□□□ 1.98
KLHL42-202ENST00000539176 DNAH12Q6ZR08 3092 aa27.39■■□□□ 1.98
KLHL42-202ENST00000539176 TARSL2A2RTX5 802 aaKnown RBP27.39■■□□□ 1.98
KLHL42-202ENST00000539176 ACLYP53396 1101 aa27.39■■□□□ 1.98
KLHL42-202ENST00000539176 WDR93Q6P2C0 686 aa27.39■■□□□ 1.98
KLHL42-202ENST00000539176 CREG2Q8IUH2 290 aa27.39■■□□□ 1.98
KLHL42-202ENST00000539176 THNSL1Q8IYQ7 743 aa27.39■■□□□ 1.98
KLHL42-202ENST00000539176 NOA1Q8NC60 698 aaKnown RBP27.39■■□□□ 1.98
KLHL42-202ENST00000539176 TMEM40Q8WWA1 233 aa27.39■■□□□ 1.98
KLHL42-202ENST00000539176 UNC93B1Q9H1C4 597 aa27.39■■□□□ 1.98
KLHL42-202ENST00000539176 PDZD7Q9H5P4 517 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms