RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RNF152Q8N8N0 203 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NUP43Q8NFH3 380 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 P2RY11Q96G91 374 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 BOD1Q96IK1 185 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NOX5Q96PH1 765 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 RBM15Q96T37 977 aaKnown RBP eCLIP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 VRK1Q99986 396 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TWSG1Q9GZX9 223 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NLRC4Q9NPP4 1024 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GGA3Q9NZ52 723 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CORO2BQ9UQ03 480 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 INVSQ9Y283 1065 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NOC2LQ9Y3T9 749 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NR2E3Q9Y5X4 410 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CCDC78A2IDD5 438 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM233B4DJY2 109 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CREB3O43889 395 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 KIF1CO43896 1103 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SLC43A1O75387 559 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 DAB1O75553 588 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PRSS23O95084 383 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 IL33O95760 270 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ONECUT2O95948 504 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 JUNP05412 331 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MYL4P12829 197 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MYF5P13349 255 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GYPEP15421 78 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 RPS6KB1P23443 525 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 KLRC1P26715 233 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 LRPAP1P30533 357 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SSTR4P31391 388 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PHKA1P46020 1223 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 STAT5BP51692 787 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ARFIP2P53365 341 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CDC42EP1Q00587 391 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SLC6A3Q01959 620 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 KIF23Q02241 960 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TOP3AQ13472 1001 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ADRM1Q16186 407 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CPEB4Q17RY0 729 aaKnown RBP eCLIP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TEDDM1Q5T9Z0 273 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 DARS2Q6PI48 645 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 APOA5Q6Q788 366 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TEPPQ6URK8 271 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TMC5Q6UXY8 1006 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ANKS1BQ7Z6G8 1248 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 AMOTL1Q8IY63 956 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NKAIN3Q8N8D7 197 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NAT16Q8N8M0 369 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 NOC3LQ8WTT2 800 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ARL8AQ96BM9 186 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CRB3Q9BUF7 120 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 STK33Q9BYT3 514 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 LRRC27Q9C0I9 530 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 LDAHQ9H6V9 325 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 DCP1AQ9NPI6 582 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MOCS1Q9NZB8 636 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GPRC5BQ9NZH0 403 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SLC23A1Q9UHI7 598 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MED16Q9Y2X0 877 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TESMINQ9Y4I5 508 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF541Q9H0D2 1346 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 UBA6A0AVT1 1052 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PRAMEF22A3QJZ6 481 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TMEM247A6NEH6 219 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 RFXAPO00287 272 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ADAMTS3O15072 1205 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 B3GALT2O43825 422 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 OPHN1O60890 802 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PLA2G1BP04054 148 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 C8BP07358 591 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 VSIG10L2P0DP72 767 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ALAS1P13196 640 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ZKSCAN1P17029 563 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SYN1P17600 705 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ABCB4P21439 1286 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CTSSP25774 331 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GPD2P43304 727 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 MAP2K6P52564 334 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 RAB1AP62820 205 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PRR5P85299 388 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PFKPQ01813 784 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 DLX2Q07687 328 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TRIM14Q14142 442 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PLEKHN1Q494U1 663 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ANO6Q4KMQ2 910 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ARHGAP29Q52LW3 1261 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 IFIT1BQ5T764 474 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GORABQ5T7V8 394 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 EFCAB2Q5VUJ9 269 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 PRAMEF18Q5VWM3 479 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 IZUMO3Q5VZ72 239 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SRLQ86TD4 932 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SMAP1Q8IYB5 467 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 GPR150Q8NGU9 434 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SNX33Q8WV41 574 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 STON2Q8WXE9 905 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 APIPQ96GX9 242 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TBCBQ99426 244 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 TACO1Q9BSH4 297 aaKnown RBP1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms