RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 E2F7Q96AV8 911 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 FANCEQ9HB96 536 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 RBM12Q9NTZ6 932 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 NXF1Q9UBU9 619 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 CHMP2BQ9UQN3 213 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 LRCH1Q9Y2L9 728 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 CPDO75976 1380 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 NCOA3Q9Y6Q9 1424 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 MBD5Q9P267 1494 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ARHGEF40Q8TER5 1519 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 TRPM1Q7Z4N2 1603 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 SLCO1B7G3V0H7 640 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 DLGAP3O95886 979 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 HSD17B3P37058 310 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 HADHAP40939 763 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 USP11P51784 963 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 NSUN2Q08J23 767 aaKnown RBP eCLIP7.27□□□□□ -1.25
SORT1-209ENST00000538502 PTK7Q13308 1070 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 KIF22Q14807 665 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 LONRF1Q17RB8 773 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 FASTKD1Q53R41 847 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 EFHC2Q5JST6 749 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 CC2D2BQ6DHV5 1058 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 TLK2Q86UE8 772 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 METTL16Q86W50 562 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 SCUBE1Q8IWY4 988 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 MSL3Q8N5Y2 521 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 RFWD2Q8NHY2 731 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 EXT2Q93063 718 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 PHF21AQ96BD5 680 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 SENP7Q9BQF6 1050 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 CD209Q9NNX6 404 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 PCDHGB4Q9UN71 923 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 AKT3Q9Y243 479 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 CSADQ9Y600 493 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 POTECB2RU33 542 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 TRIM24O15164 1050 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 KLHL41O60662 606 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 SPRP35270 261 aaPredicted RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 PTPN12Q05209 780 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 GRM1Q13255 1194 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 PLEKHM3Q6ZWE6 761 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 PASD1Q8IV76 773 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ASAP3Q8TDY4 903 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 TRIM8Q9BZR9 551 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 PABPC3Q9H361 631 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 GREM2Q9H772 168 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 RGL1Q9NZL6 768 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ZNF185O15231 689 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 TM9SF1O15321 606 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 CLPTM1O96005 669 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ZNF18P17022 549 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 CD58P19256 250 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 MAGEA4P43358 317 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 STRBPQ96SI9 672 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 SH3GL1Q99961 368 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 KCND1Q9NSA2 647 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 BARHL2Q9NY43 387 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ATP10AO60312 1499 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 SNTNA6NMZ2 147 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 E5RI56 91 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 INO80B-WBP1J3KQ70 363 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 EDRF1Q3B7T1 1238 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 CALML6Q8TD86 181 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 C1orf54Q8WWF1 131 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ATXN2LQ8WWM7 1075 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 PIK3R5Q8WYR1 880 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 RNF25Q96BH1 459 aaPredicted RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 TADA1Q96BN2 335 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 APOL6Q9BWW8 343 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 INO80BQ9C086 356 aaPredicted RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 BHMT2Q9H2M3 363 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 RIC8BQ9NVN3 520 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 TUBA8Q9NY65 449 aaPredicted RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 TAGLN3Q9UI15 199 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 CNOT7Q9UIV1 285 aaKnown RBP7.27□□□□□ -1.25
SORT1-209ENST00000538502 A2ML1A8K2U0 1454 aa7.27□□□□□ -1.25
SORT1-209ENST00000538502 ZBTB5O15062 677 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 STX7O15400 261 aaKnown RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 AHCYL1O43865 530 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 IL6STP40189 918 aaPredicted RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 PLOD1Q02809 727 aaPredicted RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 CCDC85BQ15834 202 aaPredicted RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 PAPD7Q5XG87 772 aaKnown RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 CCNJLQ8IV13 435 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 TAGAPQ8N103 731 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 CCDC126Q96EE4 140 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 NGRNQ9NPE2 291 aaKnown RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 APEX2Q9UBZ4 518 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 DCDC2Q9UHG0 476 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 XPO7Q9UIA9 1087 aaKnown RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 TTC7AQ9ULT0 858 aaPredicted RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 PHTF1Q9UMS5 762 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 FAM32AQ9Y421 112 aaKnown RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 PDZK1P1A8MUH7 402 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 ASNA1O43681 348 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 TRIM49P0CI25 452 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 TRIM49CP0CI26 452 aa7.26□□□□□ -1.25
SORT1-209ENST00000538502 ENO3P13929 434 aaPredicted RBP7.26□□□□□ -1.25
SORT1-209ENST00000538502 KRT76Q01546 638 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms