RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CHRNA1P02708 482 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 CCNE1P24864 410 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 DLG4P78352 724 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ATP11AP98196 1134 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 KLHL30Q0D2K2 578 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ARSHQ5FYA8 562 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 SLC24A5Q71RS6 500 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 PLPPR4Q7Z2D5 763 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ZNF720Q7Z2F6 126 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ZNF280BQ86YH2 543 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 THEM5Q8N1Q8 247 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 CCDC33Q8N5R6 958 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 SLC30A5Q8TAD4 765 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TAS1R2Q8TE23 839 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 SCFD1Q8WVM8 642 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 GOLGA1Q92805 767 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TRIM43Q96BQ3 446 aaPredicted RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 TCF25Q9BQ70 676 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ZCCHC17Q9NP64 241 aaKnown RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 HYOU1Q9Y4L1 999 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 HTTP42858 3142 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ANKRD62A6NC57 917 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ACKR2O00590 384 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 OGTO15294 1046 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TEX33O43247 280 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TRAPPC3O43617 180 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 CLK2P49760 499 aaKnown RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 NME3Q13232 169 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TCEA2Q15560 299 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 KCTD19Q17RG1 926 aaPredicted RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 WSCD1Q658N2 575 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 MPZL3Q6UWV2 235 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 GBP6Q6ZN66 633 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 RYBPQ8N488 228 aaPredicted RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 OR5B17Q8NGF7 314 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 ZNF558Q96NG5 402 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 AAASQ9NRG9 546 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 GUCA1BQ9UMX6 200 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 FAM186AA6NE01 2351 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 FAM47DPA6NHR8 397 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 CBFA2T2O43439 604 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 HCRTO43612 131 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 FOSL2P15408 326 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 CD44P16070 742 aaKnown RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 ANXA13P27216 316 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 CRYBB1P53674 252 aaPredicted RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 GPM6BQ13491 265 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 LPIN1Q14693 890 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 SMAD1Q15797 465 aaKnown RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 NAALADL2Q58DX5 795 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 MAMDC4Q6UXC1 1216 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 C1orf186Q6ZWK4 172 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 SPATA2LQ8IUW3 424 aaPredicted RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 APPL2Q8NEU8 664 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 TSPYL2Q9H2G4 693 aaPredicted RBP7.78□□□□□ -1.16
MSH6-209ENST00000538136 CDY1Q9Y6F8 540 aa7.78□□□□□ -1.16
MSH6-209ENST00000538136 KAT6AQ92794 2004 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 AKAP3O75969 853 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 LRG1P02750 347 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 NRIP1P48552 1158 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 CLCNKBP51801 687 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 PTENP60484 403 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 ASIC2Q16515 512 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 GAS2L3Q86XJ1 694 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 SIX6OS1Q8N1H7 587 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 TNFRSF25Q93038 417 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 KCNG1Q9UIX4 513 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 ATG2BQ96BY7 2078 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 ADGRA3Q8IWK6 1321 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 HLA-DRAP01903 254 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 ITGB8P26012 769 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 DDR2Q16832 855 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 CCDC142Q17RM4 750 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 SLC39A12Q504Y0 691 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 FBXO47Q5MNV8 452 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 BSPRYQ5W0U4 402 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 ADAM32Q8TC27 787 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 KAT5Q92993 513 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 COLEC11Q9BWP8 271 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 CDH22Q9UJ99 828 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 PIEZO1Q92508 2521 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 NUMA1Q14980 2115 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 PAPPAQ13219 1627 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 UNC80Q8N2C7 3258 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 LCHNA4D1U4 455 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 M0QYV0 167 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 CLDN5O00501 218 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 CYP26A1O43174 497 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 MAP3K6O95382 1288 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 AFPP02771 609 aaKnown RBP7.77□□□□□ -1.17
MSH6-209ENST00000538136 CLTAP09496 248 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 YWHAHQ04917 246 aaPredicted RBP7.77□□□□□ -1.17
MSH6-209ENST00000538136 DUSP4Q13115 394 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 FAM182AQ5T1J6 154 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 OVOS1Q6IE37 1185 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 CCDC117Q8IWD4 279 aaPredicted RBP7.77□□□□□ -1.17
MSH6-209ENST00000538136 TTC30BQ8N4P2 665 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 FBXO22Q8NEZ5 403 aa7.77□□□□□ -1.17
MSH6-209ENST00000538136 DNAI2Q9GZS0 605 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms