RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 CCDC97Q96F63 343 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-210ENST00000538120 EPAS1Q99814 870 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 ADAM33Q9BZ11 813 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 TMEM134Q9H6X4 195 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 RAB20Q9NX57 234 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 MYH9P35579 1960 aaKnown RBP11.55□□□□□ -0.56
CLIP1-210ENST00000538120 MYH10P35580 1976 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 ZSCAN5CA6NGD5 496 aaPredicted RBP11.55□□□□□ -0.56
CLIP1-210ENST00000538120 TMCO5BA8MYB1 307 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 K7ERI5 159 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 SGPL1O95470 568 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 TMEM253P0C7T8 217 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 DLATP10515 647 aaKnown RBP11.55□□□□□ -0.56
CLIP1-210ENST00000538120 MARK3P27448 753 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 STRN3Q13033 797 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 PSMD6Q15008 389 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 PLCB4Q15147 1175 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 GPR162Q16538 588 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 ZBTB41Q5SVQ8 909 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 WDR78Q5VTH9 848 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 KCTD16Q68DU8 428 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 PLPPR4Q7Z2D5 763 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 FBXL13Q8NEE6 735 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 PRPF31Q8WWY3 499 aaKnown RBP11.55□□□□□ -0.56
CLIP1-210ENST00000538120 SHC3Q92529 594 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 TATDN2Q93075 761 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 ZDHHC16Q969W1 377 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 MPHOSPH6Q99547 160 aaKnown RBP11.55□□□□□ -0.56
CLIP1-210ENST00000538120 TARS2Q9BW92 718 aaKnown RBP11.55□□□□□ -0.56
CLIP1-210ENST00000538120 ZNF408Q9H9D4 720 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 NOCTQ9UK39 431 aaKnown RBP11.55□□□□□ -0.56
CLIP1-210ENST00000538120 STXBP5LQ9Y2K9 1186 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 SCN4AP35499 1836 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 NCANO14594 1321 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 ADGRA2Q96PE1 1338 aa11.55□□□□□ -0.56
CLIP1-210ENST00000538120 IGKV6-21A0A0C4DH24 114 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 ADCY3O60266 1144 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 SCP2P22307 547 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 DNA2P51530 1060 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 GTF2A1P52655 376 aaPredicted RBP11.54□□□□□ -0.56
CLIP1-210ENST00000538120 PPFIA1Q13136 1202 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 NOP9Q86U38 636 aaKnown RBP11.54□□□□□ -0.56
CLIP1-210ENST00000538120 ATP8B4Q8TF62 1192 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 ARHGEF26Q96DR7 871 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 FAM167AQ96KS9 214 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 HS3ST6Q96QI5 342 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 PCDHB18PQ96TA0 734 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 SH3GL2Q99962 352 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 AZI2Q9H6S1 392 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 ACP6Q9NPH0 428 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 RBM12Q9NTZ6 932 aaKnown RBP11.54□□□□□ -0.56
CLIP1-210ENST00000538120 AGO2Q9UKV8 859 aaKnown RBP11.54□□□□□ -0.56
CLIP1-210ENST00000538120 RPS6KL1Q9Y6S9 549 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 FAM169AQ9Y6X4 670 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 SIP14410 1827 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 PTPRJQ12913 1337 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 A0A0B4J269 797 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 ESYT3A0FGR9 886 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 FAM170AA1A519 330 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 BTBD19C9JJ37 291 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 PDHXO00330 501 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 KRT14P02533 472 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 C4BPAP04003 597 aaKnown RBP11.54□□□□□ -0.56
CLIP1-210ENST00000538120 ACOT2P49753 483 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 ZNF792Q3KQV3 632 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 LMBRD2Q68DH5 695 aaPredicted RBP11.54□□□□□ -0.56
CLIP1-210ENST00000538120 RPUSD2Q8IZ73 545 aaKnown RBP11.54□□□□□ -0.56
CLIP1-210ENST00000538120 PPM1KQ8N3J5 372 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 GPRC5AQ8NFJ5 357 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 GLG1Q92896 1179 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 SPATA33Q96N06 139 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 KIAA1586Q9HCI6 787 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 OSGEPQ9NPF4 335 aa11.54□□□□□ -0.56
CLIP1-210ENST00000538120 A0A087WUV0 522 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 EIF3HO15372 352 aaKnown RBP eCLIP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 CYP26A1O43174 497 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 KIF4AO95239 1232 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 FAM153BP0C7A2 387 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 TXNP10599 105 aaKnown RBP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 ATP1A2P50993 1020 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 MFAP3P55082 362 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 PDCLQ13371 301 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 IFI16Q16666 785 aaKnown RBP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 KCTD19Q17RG1 926 aaPredicted RBP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 FAM153CQ494X1 144 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 SLC35G2Q8TBE7 412 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 EPS8L1Q8TE68 723 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 BRI3BPQ8WY22 251 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 NT5C1BQ96P26 610 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 ZIM3Q96PE6 472 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 PI4K2AQ9BTU6 479 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 CCDC113Q9H0I3 377 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 THAP2Q9H0W7 228 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 ISCUQ9H1K1 167 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 FAM153AQ9UHL3 310 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 PNMA3Q9UL41 463 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 EBAG9O00559 213 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 KIAA0391O15091 583 aaKnown RBP11.53□□□□□ -0.56
CLIP1-210ENST00000538120 GLI1P08151 1106 aa11.53□□□□□ -0.56
CLIP1-210ENST00000538120 USP8P40818 1118 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms