RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 LRRC32Q14392 662 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 PSAPL1Q6NUJ1 521 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 VITQ6UXI7 678 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 PDZD4Q76G19 769 aaPredicted RBP12.35□□□□□ -0.43
CLPB-208ENST00000538021 RTL10Q7L3V2 364 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 C4orf19Q8IY42 314 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 ASAP3Q8TDY4 903 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 ASB16Q96NS5 453 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 AVENQ9NQS1 362 aaPredicted RBP12.35□□□□□ -0.43
CLPB-208ENST00000538021 RGL1Q9NZL6 768 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 SDK1Q7Z5N4 2213 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 TICRRQ7Z2Z1 1910 aa12.35□□□□□ -0.43
CLPB-208ENST00000538021 ZMYM2Q9UBW7 1377 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 A0A1B0GUA9 196 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 K7ESF4 209 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 ZNF197O14709 1029 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 SLC37A4O43826 429 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 ZNF806P0C7X5 589 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 CPA1P15085 419 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 FGFR3P22607 806 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 HOXC13P31276 330 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 CYP4A11Q02928 519 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 SPIRE1Q08AE8 756 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 PTGDRQ13258 359 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 CTTNQ14247 550 aaKnown RBP12.34□□□□□ -0.43
CLPB-208ENST00000538021 PRSS36Q5K4E3 855 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 Q6ZS52 159 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 Q6ZUG5 572 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 IFNLR1Q8IU57 520 aaPredicted RBP12.34□□□□□ -0.43
CLPB-208ENST00000538021 RASEFQ8IZ41 740 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 CSGALNACT1Q8TDX6 532 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 DEPDC1BQ8WUY9 529 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 SMARCD2Q92925 531 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 BRF1Q92994 677 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 DYDC2Q96IM9 177 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 ZSWIM3Q96MP5 696 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 LSM14BQ9BX40 385 aaKnown RBP12.34□□□□□ -0.43
CLPB-208ENST00000538021 RNF26Q9BY78 433 aaPredicted RBP12.34□□□□□ -0.43
CLPB-208ENST00000538021 CXCL16Q9H2A7 254 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 TRPV5Q9NQA5 729 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 XPNPEP1Q9NQW7 623 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 SNTG2Q9NY99 539 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 PCDHA4Q9UN74 947 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 VWA8A3KMH1 1905 aa12.34□□□□□ -0.43
CLPB-208ENST00000538021 GREB1Q4ZG55 1949 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 FASNP49327 2511 aaKnown RBP12.33□□□□□ -0.44
CLPB-208ENST00000538021 ZFYVE26Q68DK2 2539 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 ANKRD11Q6UB99 2663 aaPredicted RBP12.33□□□□□ -0.44
CLPB-208ENST00000538021 ARHGEF37A1IGU5 675 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 WDR27A2RRH5 827 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 PTGESO14684 152 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 MARCH6O60337 910 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 B3GAT3O94766 335 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 IGFBP6P24592 240 aaPredicted RBP12.33□□□□□ -0.44
CLPB-208ENST00000538021 TKTP29401 623 aaKnown RBP12.33□□□□□ -0.44
CLPB-208ENST00000538021 KPNA1P52294 538 aaPredicted RBP12.33□□□□□ -0.44
CLPB-208ENST00000538021 ARPP19P56211 112 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 POU5F1BQ06416 359 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 FOXC1Q12948 553 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 EPHA7Q15375 998 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 TMEM132AQ24JP5 1023 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 CYP4A22Q5TCH4 519 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 NCAPH2Q6IBW4 605 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 MOXD1Q6UVY6 613 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 SMOC1Q9H4F8 434 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 ZSWIM4Q9H7M6 989 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 CYP4F11Q9HBI6 524 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 SH3GLB2Q9NR46 395 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 C2orf42Q9NWW7 574 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
CLPB-208ENST00000538021 COL4A2P08572 1712 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 SLC38A8A6NNN8 435 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 I3L4J1 428 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 RECQL4O94761 1208 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 EPN2O95208 641 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 PAPSS2O95340 614 aaPredicted RBP12.32□□□□□ -0.44
CLPB-208ENST00000538021 HMGB1P09429 215 aaKnown RBP12.32□□□□□ -0.44
CLPB-208ENST00000538021 GJA1P17302 382 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 SPINK2P20155 84 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 GLRA2P23416 452 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 ARL2P36404 184 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 CCR2P41597 374 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 SOX9P48436 509 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
CLPB-208ENST00000538021 ROR1Q01973 937 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 KRT32Q14532 448 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 NTRK3Q16288 839 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 INF2Q27J81 1249 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 RNF43Q68DV7 783 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 ANKS3Q6ZW76 656 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 CACNA2D4Q7Z3S7 1137 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 WDR5BQ86VZ2 330 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 MFSD6LQ8IWD5 586 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 TPH2Q8IWU9 490 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 BLIDQ8IZY5 108 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 KDF1Q8NAX2 398 aaPredicted RBP12.32□□□□□ -0.44
CLPB-208ENST00000538021 ZNF461Q8TAF7 563 aa12.32□□□□□ -0.44
CLPB-208ENST00000538021 ZSCAN18Q8TBC5 510 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms