RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 CLCNKBP51801 687 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CSTF1Q05048 431 aaKnown RBP14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ORC2Q13416 577 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ME3Q16798 604 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ZBTB41Q5SVQ8 909 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ELMOD1Q8N336 334 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 KIFAP3Q92845 792 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CCDC94Q9BW85 323 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CCDC113Q9H0I3 377 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 TMEM60Q9H2L4 133 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 LTB4R2Q9NPC1 389 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 SLC38A7Q9NVC3 462 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 HCFC1R1Q9NWW0 138 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 GDE1Q9NZC3 331 aa14.26□□□□□ -0.13
TNFRSF1A-207ENST00000535958 PHLPP2Q6ZVD8 1323 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 TTLL13PA6NNM8 815 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 WNT7AO00755 349 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 JAK2O60674 1132 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 EIF5BO60841 1220 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 GLULP15104 373 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 RPA1P27694 616 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 TKTP29401 623 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CCT6AP40227 531 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ARPP19P56211 112 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 NAB2Q15742 525 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ZNF568Q3ZCX4 644 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 EEF1DP3Q658K8 133 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ZNF852Q6ZMS4 543 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 BSNDQ8WZ55 320 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 MCRS1Q96EZ8 462 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 DDX27Q96GQ7 796 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 NELL2Q99435 816 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 DDX23Q9BUQ8 820 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 KIFC3Q9BVG8 833 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 DNMT3BQ9UBC3 853 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 USP20Q9Y2K6 914 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 NUB1Q9Y5A7 615 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 PCDHGA2Q9Y5H1 932 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 BACE2Q9Y5Z0 518 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 VWA8A3KMH1 1905 aa14.25□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 H7C4K7 107 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 K7ERI5 159 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ECI2O75521 394 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 LARGE1O95461 756 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 RHOP08100 348 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 PTPN2P17706 415 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CD72P21854 359 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 SDHBP21912 280 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 MUTP22033 750 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 GUCY1B3Q02153 619 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 PPP2R5DQ14738 602 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 GPR161Q8N6U8 529 aaKnown RBP14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 C8orf76Q96K31 380 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 PPP1R10Q96QC0 940 aaKnown RBP14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 RAB34Q9BZG1 259 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 BHMT2Q9H2M3 363 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 GOLGA2P5Q9HBQ8 144 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 NOL7Q9UMY1 257 aaKnown RBP14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 STK24Q9Y6E0 443 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 FANCMQ8IYD8 2048 aa14.24□□□□□ -0.13
TNFRSF1A-207ENST00000535958 PATJQ8NI35 1801 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 I3L4J1 428 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ZNF197O14709 1029 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 BRCC3P46736 316 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 NEK4P51957 841 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 OSTNP61366 133 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ROR1Q01973 937 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 DMP1Q13316 513 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ZNF174Q15697 407 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 UPP1Q16831 310 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 VARS2Q5ST30 1063 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 IQCEQ6IPM2 695 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 PDZD4Q76G19 769 aaPredicted RBP14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 DCLK2Q8N568 766 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 DNASE1L2Q92874 299 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CORO1BQ9BR76 489 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 TCHPQ9BT92 498 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 MRPL4Q9BYD3 311 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CXCL16Q9H2A7 254 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 BRD9Q9H8M2 597 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CYP4F11Q9HBI6 524 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ZSCAN32Q9NX65 697 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 RAB23Q9ULC3 237 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 TNFSF13BQ9Y275 285 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 DOCK6Q96HP0 2047 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 DCHS1Q96JQ0 3298 aa14.23□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ZNF292O60281 2723 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 PODXLO00592 558 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 MAN2B1O00754 1011 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 SYN3O14994 580 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 EDN1P05305 212 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 NEFLP07196 543 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 HARSP12081 509 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CEBPBP17676 345 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 TARSP26639 723 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 GRM5P41594 1212 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 TTC38Q5R3I4 469 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 CYP4A22Q5TCH4 519 aa14.22□□□□□ -0.13
TNFRSF1A-207ENST00000535958 ZNF461Q8TAF7 563 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms