RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 CLEC17AQ6ZS10 378 aa24.73■■□□□ 1.55
SFSWAP-204ENST00000535399 TAS1R1Q7RTX1 841 aa24.73■■□□□ 1.55
SFSWAP-204ENST00000535399 MRPL43Q8N983 215 aaKnown RBP24.73■■□□□ 1.55
SFSWAP-204ENST00000535399 UROC1Q96N76 676 aa24.73■■□□□ 1.55
SFSWAP-204ENST00000535399 HERC2P3Q9BVR0 1158 aa24.73■■□□□ 1.55
SFSWAP-204ENST00000535399 GPR62Q9BZJ7 368 aa24.73■■□□□ 1.55
SFSWAP-204ENST00000535399 ADAM28Q9UKQ2 775 aa24.73■■□□□ 1.55
SFSWAP-204ENST00000535399 C2orf71A6NGG8 1288 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 SOD2P04179 222 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 IGFBP6P24592 240 aaPredicted RBP24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 CLCNKBP51801 687 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 PNOCQ13519 176 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 KCNB1Q14721 858 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 UPP1Q16831 310 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 ARMCX5Q6P1M9 558 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 FUT10Q6P4F1 479 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 CD300LGQ6UXG3 332 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 CD302Q8IX05 232 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 AUTS2Q8WXX7 1259 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 PPP2R3CQ969Q6 453 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 SAAL1Q96ER3 474 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 KIF12Q96FN5 646 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 FAM213AQ9BRX8 229 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 PCIF1Q9H4Z3 704 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 AGPAT3Q9NRZ7 376 aa24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 SPTBN5Q9NRC6 3674 aaKnown RBP24.72■■□□□ 1.55
SFSWAP-204ENST00000535399 TDRD15B5MCY1 1934 aaKnown RBP24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 ATG2AQ2TAZ0 1938 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 TMEM189-UBE2V1I3L0A0 370 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 TADA2AO75478 443 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 CXCL14O95715 111 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 NRIP1P48552 1158 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 UBE2HP62256 183 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 KNOP1Q1ED39 458 aaKnown RBP24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 CTC1Q2NKJ3 1217 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 DCLRE1AQ6PJP8 1040 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 RBM23Q86U06 439 aaKnown RBP24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 HASPINQ8TF76 798 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 CCDC47Q96A33 483 aaKnown RBP24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 FAM212AQ96EL1 285 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 DDX27Q96GQ7 796 aaKnown RBP24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 TSPAN18Q96SJ8 248 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 TLE6Q9H808 572 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 TUBGCP4Q9UGJ1 667 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 IRAK3Q9Y616 596 aa24.71■■□□□ 1.55
SFSWAP-204ENST00000535399 GOLGA8IPA6NC78 632 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 GOLGA8JA6NMD2 632 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 PER2O15055 1255 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 KIAA0391O15091 583 aaKnown RBP24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 NCK2O43639 380 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 EXTL3O43909 919 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 LILRB3O75022 631 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 SNRPFP62306 86 aaKnown RBP24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 BMS1Q14692 1282 aaKnown RBP24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 PTPN14Q15678 1187 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 DUSP6Q16828 381 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 ELOA2Q8IYF1 753 aaPredicted RBP24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 TMEM130Q8N3G9 435 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 HLA-CQ95604 372 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 PABPC5Q96DU9 382 aaKnown RBP24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 IGFLR1Q9H665 355 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 ASB7Q9H672 318 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 CHST7Q9NS84 486 aa24.7■■□□□ 1.54
SFSWAP-204ENST00000535399 SF3B1O75533 1304 aaKnown RBP eCLIP24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 PODXLO00592 558 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 PRPF40AO75400 957 aaKnown RBP24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 B3GAT3O94766 335 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 LDHAP00338 332 aaKnown RBP24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 RPL9P32969 192 aaKnown RBP24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 JADE1Q6IE81 842 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 BRSK2Q8IWQ3 736 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 EFHBQ8N7U6 833 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 C3orf58Q8NDZ4 430 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 CDCA3Q99618 268 aaPredicted RBP24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 UBE2ZQ9H832 354 aaPredicted RBP24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 HSPBP1Q9NZL4 362 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 THEGQ9P2T0 379 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 UBQLN1Q9UMX0 589 aaKnown RBP24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 COG5Q9UP83 839 aa24.69■■□□□ 1.54
SFSWAP-204ENST00000535399 BRWD1Q9NSI6 2320 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 LINC01565O15544 149 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 KINO60870 393 aaKnown RBP24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 NFICP08651 508 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 CYP3A5P20815 502 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 LRPAP1P30533 357 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 WNT7BP56706 349 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 KIAA0319Q5VV43 1072 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 HS2ST1Q7LGA3 356 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 C12orf56Q8IXR9 622 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 GPD1LQ8N335 351 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 SPATA20Q8TB22 786 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 KCTD10Q9H3F6 313 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 DERAQ9Y315 318 aa24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.68■■□□□ 1.54
SFSWAP-204ENST00000535399 CLIC2O15247 247 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 URODP06132 367 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 GLUD2P49448 558 aa24.67■■□□□ 1.54
SFSWAP-204ENST00000535399 GUCY2FP51841 1108 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms