RNA–Protein interactions for RNA: ENST00000534625.1

ATM-224, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-224ENST00000534625 ZCCHC4Q9H5U6 513 aa6.06□□□□□ -1.44
ATM-224ENST00000534625 SPC25Q9HBM1 224 aa6.06□□□□□ -1.44
ATM-224ENST00000534625 PDGFCQ9NRA1 345 aa6.06□□□□□ -1.44
ATM-224ENST00000534625 TOMM22Q9NS69 142 aa6.06□□□□□ -1.44
ATM-224ENST00000534625 MBD1Q9UIS9 605 aaPredicted RBP6.06□□□□□ -1.44
ATM-224ENST00000534625 DDX41Q9UJV9 622 aaKnown RBP6.06□□□□□ -1.44
ATM-224ENST00000534625 TBX21Q9UL17 535 aa6.06□□□□□ -1.44
ATM-224ENST00000534625 CCPG1Q9ULG6 757 aa6.06□□□□□ -1.44
ATM-224ENST00000534625 GPR55Q9Y2T6 319 aaPredicted RBP6.06□□□□□ -1.44
ATM-224ENST00000534625 VCANP13611 3396 aa6.06□□□□□ -1.44
ATM-224ENST00000534625 CHD9Q3L8U1 2897 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 GRIN2DO15399 1336 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 FRMPD2Q68DX3 1309 aaPredicted RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 A0A0U1RQG5 324 aaPredicted RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 HRKO00198 91 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 RECKO95980 971 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 CD4P01730 458 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 PCP11498 1178 aaKnown RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 IMPDH2P12268 514 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 YBX1P67809 324 aaKnown RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 NUCB1Q02818 461 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 FPGSQ05932 587 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 SSPNQ14714 243 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 FSCN1Q16658 493 aaKnown RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 TDRD10Q5VZ19 366 aaKnown RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 IQSEC1Q6DN90 963 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 MFSD5Q6N075 450 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 CXCL17Q6UXB2 119 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 NSMFQ6X4W1 530 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 RUFY4Q6ZNE9 571 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 MFSD6Q6ZSS7 791 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 NOL8Q76FK4 1167 aaKnown RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 C16orf59Q7L2K0 433 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 EEPD1Q7L9B9 569 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 FBXO16Q8IX29 292 aaPredicted RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 FAM126BQ8IXS8 530 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 EXOC6Q8TAG9 804 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 CLEC4DQ8WXI8 215 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 RNPC3Q96LT9 517 aaKnown RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 TTC14Q96N46 770 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 CDX2Q99626 313 aaPredicted RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 AP5S1Q9NUS5 200 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 PPT2Q9UMR5 302 aa6.05□□□□□ -1.44
ATM-224ENST00000534625 BAZ2BQ9UIF8 2168 aaKnown RBP6.05□□□□□ -1.44
ATM-224ENST00000534625 NEDD4P46934 1319 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 MROH7Q68CQ1 1323 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 CHD7Q9P2D1 2997 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 PTPDC1A2A3K4 754 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 CABYRO75952 493 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 CSF2RAP15509 400 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 VIPR1P32241 457 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 ALDH5A1P51649 535 aaPredicted RBP6.04□□□□□ -1.44
ATM-224ENST00000534625 MFAP1P55081 439 aaKnown RBP6.04□□□□□ -1.44
ATM-224ENST00000534625 ERVFRD-1P60508 538 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 SRSF3P84103 164 aaKnown RBP6.04□□□□□ -1.44
ATM-224ENST00000534625 PPIGQ13427 754 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATM-224ENST00000534625 DUSP28Q4G0W2 176 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 ANKRD39Q53RE8 183 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 TMEM240Q5SV17 173 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 AXDND1Q5T1B0 1012 aaPredicted RBP6.04□□□□□ -1.44
ATM-224ENST00000534625 CWC27Q6UX04 472 aaKnown RBP6.04□□□□□ -1.44
ATM-224ENST00000534625 TLK2Q86UE8 772 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 ANKS1AQ92625 1134 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 RNF34Q969K3 372 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 DHRS1Q96LJ7 313 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 YTHDC1Q96MU7 727 aaKnown RBP6.04□□□□□ -1.44
ATM-224ENST00000534625 TM9SF2Q99805 663 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.04□□□□□ -1.44
ATM-224ENST00000534625 CDADC1Q9BWV3 514 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 SLC12A9Q9BXP2 914 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 AP5M1Q9H0R1 490 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 RNF41Q9H4P4 317 aaPredicted RBP6.04□□□□□ -1.44
ATM-224ENST00000534625 VTA1Q9NP79 307 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 KLHL14Q9P2G3 628 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 Q9Y3F1 56 aa6.04□□□□□ -1.44
ATM-224ENST00000534625 WDR19Q8NEZ3 1342 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 LRRC37A2A6NM11 1700 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 LOC102724159A0A0B4J2E5 919 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.03□□□□□ -1.44
ATM-224ENST00000534625 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.03□□□□□ -1.44
ATM-224ENST00000534625 B4E1Z4 1266 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 H0Y8X5 98 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 ZNF213O14771 459 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 ZEB2O60315 1214 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 GOLGA8HP0CJ92 632 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 EDNRBP24530 442 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 CALML3P27482 149 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 CYP2C18P33260 490 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 EPHB3P54753 998 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 PSMC6P62333 389 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 RPS6P62753 249 aaKnown RBP6.03□□□□□ -1.44
ATM-224ENST00000534625 ITGA7Q13683 1181 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 PWP2Q15269 919 aaKnown RBP6.03□□□□□ -1.44
ATM-224ENST00000534625 GPATCH4Q5T3I0 446 aaKnown RBP6.03□□□□□ -1.44
ATM-224ENST00000534625 GALNT18Q6P9A2 607 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 SLC30A10Q6XR72 485 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 UNC5AQ6ZN44 842 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 ZNF365Q70YC5 407 aa6.03□□□□□ -1.44
ATM-224ENST00000534625 LSRQ86X29 649 aaPredicted RBP6.03□□□□□ -1.44
ATM-224ENST00000534625 DGKHQ86XP1 1220 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms