RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	TDRD10	Q5VZ19	366 aa	Known RBP	16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	DPP7	Q9UHL4	492 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TUBE1	Q9UJT0	475 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FAM96A	Q9H5X1	160 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	MYO3A	Q8NEV4	1616 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	GOLGA8M	H3BSY2	632 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	EIF3D	O15371	548 aa	Known RBP eCLIP	16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ATN1	P54259	1190 aa	Predicted RBP	16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FBXW4	P57775	412 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TMPRSS15	P98073	1019 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SFSWAP	Q12872	951 aa	Known RBP	16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	EMB	Q6PCB8	327 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ATPAF2	Q8N5M1	289 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	STK33	Q9BYT3	514 aa		16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	NOVA2	Q9UNW9	492 aa	Known RBP	16.62	■□□□□ 0.25
NCAPD3-213	ENST00000534532	GPS1	Q13098	491 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	LBR	Q14739	615 aa	Known RBP	16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PDXDC1	Q6P996	788 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SERPINI1	Q99574	410 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	POLR3C	Q9BUI4	534 aa	Predicted RBP	16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	C2CD2L	O14523	706 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	HADHA	P40939	763 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FMO5	P49326	533 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	DEUP1	Q05D60	604 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CD302	Q8IX05	232 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FOPNL	Q96NB1	174 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PDHX	O00330	501 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PGK2	P07205	417 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SSTR3	P32745	418 aa	Predicted RBP	16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SLC7A5	Q01650	507 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	EDRF1	Q3B7T1	1238 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TRIM59	Q8IWR1	403 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ENTPD7	Q9NQZ7	604 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	NAGPA	Q9UK23	515 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TMX2	Q9Y320	296 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532		E9PCH4	1651 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532		F5H423	210 aa	Predicted RBP	16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ANP32D	O95626	131 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	NPEPPS	P55786	919 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	HABP4	Q5JVS0	413 aa	Known RBP	16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PPM1N	Q8N819	430 aa		16.61	■□□□□ 0.25
NCAPD3-213	ENST00000534532	KRT14	P02533	472 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CYP11B2	P19099	503 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SLC26A2	P50443	739 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TAF11	Q15544	211 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TACO1	Q9BSH4	297 aa	Known RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	GTSE1	Q9NYZ3	720 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CNTNAP5	Q8WYK1	1306 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	RIMS1	Q86UR5	1692 aa	Known RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SYTL3	Q4VX76	610 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PPHLN1	Q8NEY8	458 aa	Known RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TTC17	Q96AE7	1141 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	HPDL	Q96IR7	371 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TARS2	Q9BW92	718 aa	Known RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	NIF3L1	Q9GZT8	377 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CATSPERB	Q9H7T0	1116 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ITM2B	Q9Y287	266 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PITPNM2	Q9BZ72	1349 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PPRC1	Q5VV67	1664 aa	Known RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PIK3R2	O00459	728 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	STRN	O43815	780 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	HLA-DRA	P01903	254 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	VCAM1	P19320	739 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ZNF211	Q13398	564 aa	Predicted RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	EFHC1	Q5JVL4	640 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	RASSF3	Q86WH2	238 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	MAML1	Q92585	1016 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PIK3C2B	O00750	1634 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	UROD	P06132	367 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FAM200B	P0CF97	657 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	C10orf120	Q5SQS8	335 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ZC3H18	Q86VM9	953 aa	Known RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	UCMA	Q8WVF2	138 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PABPC5	Q96DU9	382 aa	Known RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	PPP1R2P1	Q96PQ5	205 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	RRAGD	Q9NQL2	400 aa	Predicted RBP	16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FAM49B	Q9NUQ9	324 aa		16.6	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TTC26	A0AVF1	554 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ATIC	P31939	592 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	SPARCL1	Q14515	664 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	USP50	Q70EL3	339 aa	Predicted RBP	16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	UPF3A	Q9H1J1	476 aa	Known RBP	16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	TMEM8A	Q9HCN3	771 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	UVRAG	Q9P2Y5	699 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	NFU1	Q9UMS0	254 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CPS1	P31327	1500 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	HIST1H2AD	P20671	130 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	FXR2	P51116	673 aa	Known RBP eCLIP	16.59	■□□□□ 0.25	8e-6	■■■■□ 21.8
NCAPD3-213	ENST00000534532	NNT	Q13423	1086 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	ACAD11	Q709F0	780 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CHSY1	Q86X52	802 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CCNYL1	Q8N7R7	359 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	HIST1H2AH	Q96KK5	128 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	HIST1H2AJ	Q99878	128 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	H2AFJ	Q9BTM1	129 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CAPN7	Q9Y6W3	813 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	CFLAR	O15519	480 aa		16.59	■□□□□ 0.25
NCAPD3-213	ENST00000534532	MAP4	P27816	1152 aa	Known RBP	16.59	■□□□□ 0.25

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms