RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 ZNF507Q8TCN5 953 aa14.59□□□□□ -0.07
CMTM1-219ENST00000533953 HLA-CQ95604 372 aa14.59□□□□□ -0.07
CMTM1-219ENST00000533953 KIF12Q96FN5 646 aa14.59□□□□□ -0.07
CMTM1-219ENST00000533953 FAM213AQ9BRX8 229 aa14.59□□□□□ -0.07
CMTM1-219ENST00000533953 RPF1Q9H9Y2 349 aaKnown RBP14.59□□□□□ -0.07
CMTM1-219ENST00000533953 CNTN3Q9P232 1028 aa14.59□□□□□ -0.07
CMTM1-219ENST00000533953 EXOC7Q9UPT5 735 aa14.59□□□□□ -0.07
CMTM1-219ENST00000533953 MYH11P35749 1972 aa14.59□□□□□ -0.07
CMTM1-219ENST00000533953 ZMYM2Q9UBW7 1377 aa14.59□□□□□ -0.07
CMTM1-219ENST00000533953 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.58□□□□□ -0.08
CMTM1-219ENST00000533953 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.58□□□□□ -0.08
CMTM1-219ENST00000533953 CLIC2O15247 247 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 TGFB1I1O43294 461 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 EFEMP2O95967 443 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 CTSAP10619 480 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 KCNE1P15382 129 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 BRCC3P46736 316 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 ADAM15Q13444 863 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 PNOCQ13519 176 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 SCARA3Q6AZY7 606 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 JADE1Q6IE81 842 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 SLFN12LQ6IEE8 588 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 FUT10Q6P4F1 479 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 KIAA0895Q8NCT3 520 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 UBE2ZQ9H832 354 aaPredicted RBP14.58□□□□□ -0.08
CMTM1-219ENST00000533953 NGRNQ9NPE2 291 aaKnown RBP14.58□□□□□ -0.08
CMTM1-219ENST00000533953 EXOC1Q9NV70 894 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 THEGQ9P2T0 379 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 ADAM28Q9UKQ2 775 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 MAPK8IP1Q9UQF2 711 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 EYSQ5T1H1 3165 aa14.58□□□□□ -0.08
CMTM1-219ENST00000533953 PPEF2O14830 753 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 CLASP2O75122 1294 aaKnown RBP14.57□□□□□ -0.08
CMTM1-219ENST00000533953 B3GAT3O94766 335 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 GLP2RO95838 553 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 NFICP08651 508 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 RPL17P18621 184 aaKnown RBP14.57□□□□□ -0.08
CMTM1-219ENST00000533953 ABCD1P33897 745 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 ALCAMQ13740 583 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 SMC1AQ14683 1233 aaKnown RBP14.57□□□□□ -0.08
CMTM1-219ENST00000533953 PTPN14Q15678 1187 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 DUSP6Q16828 381 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 UPP1Q16831 310 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 CTC1Q2NKJ3 1217 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 KANK3Q6NY19 840 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 CEP57Q86XR8 500 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 RNF168Q8IYW5 571 aaPredicted RBP14.57□□□□□ -0.08
CMTM1-219ENST00000533953 FEZF2Q8TBJ5 459 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 IPO9Q96P70 1041 aaKnown RBP14.57□□□□□ -0.08
CMTM1-219ENST00000533953 APOL5Q9BWW9 433 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 TMEM206Q9H813 350 aa14.57□□□□□ -0.08
CMTM1-219ENST00000533953 BARX2Q9UMQ3 279 aaPredicted RBP14.57□□□□□ -0.08
CMTM1-219ENST00000533953 PODXLO00592 558 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 LILRB3O75022 631 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 TBX10O75333 385 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 PRPF40AO75400 957 aaKnown RBP14.56□□□□□ -0.08
CMTM1-219ENST00000533953 SOD2P04179 222 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 CNPP09543 421 aaKnown RBP14.56□□□□□ -0.08
CMTM1-219ENST00000533953 CYP2J2P51589 502 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 FAM160A1Q05DH4 1040 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 PPP2R3AQ06190 1150 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 POSTNQ15063 836 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 ZBTB6Q15916 424 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 RTP2Q5QGT7 225 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 FAM171A1Q5VUB5 890 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 KIAA0319Q5VV43 1072 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 PDE12Q6L8Q7 609 aaKnown RBP14.56□□□□□ -0.08
CMTM1-219ENST00000533953 ARMCX5Q6P1M9 558 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 DCLRE1AQ6PJP8 1040 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 PRSS55Q6UWB4 352 aaPredicted RBP14.56□□□□□ -0.08
CMTM1-219ENST00000533953 STXBP4Q6ZWJ1 553 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 GLYCTKQ8IVS8 523 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 EFHBQ8N7U6 833 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 RDH13Q8NBN7 331 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 PABPC5Q96DU9 382 aaKnown RBP14.56□□□□□ -0.08
CMTM1-219ENST00000533953 KLHL5Q96PQ7 755 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 HERC2P3Q9BVR0 1158 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 PLEKHA5Q9HAU0 1116 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 AGPAT3Q9NRZ7 376 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 CLEC1BQ9P126 229 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 PRUNE2Q8WUY3 3088 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 REV3LO60673 3130 aa14.56□□□□□ -0.08
CMTM1-219ENST00000533953 EIF3DO15371 548 aaKnown RBP eCLIP14.55□□□□□ -0.08
CMTM1-219ENST00000533953 ADRB2P07550 413 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 GARTP22102 1010 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 GLUD2P49448 558 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 NDUFV1P49821 464 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 COL19A1Q14993 1142 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 LMBRD2Q68DH5 695 aaPredicted RBP14.55□□□□□ -0.08
CMTM1-219ENST00000533953 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 KIAA1841Q6NSI8 718 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 CBWD2Q8IUF1 395 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 EFCAB13Q8IY85 973 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 SMYD4Q8IYR2 804 aaPredicted RBP14.55□□□□□ -0.08
CMTM1-219ENST00000533953 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.55□□□□□ -0.08
CMTM1-219ENST00000533953 RIN2Q8WYP3 895 aaPredicted RBP14.55□□□□□ -0.08
CMTM1-219ENST00000533953 ASB2Q96Q27 587 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 MRPL17Q9NRX2 175 aaKnown RBP14.55□□□□□ -0.08
CMTM1-219ENST00000533953 CHST7Q9NS84 486 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 SLC38A7Q9NVC3 462 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms