RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 RNASELQ05823 741 aaKnown RBP23.66■■□□□ 1.38
VPS51-212ENST00000533656 PAN2Q504Q3 1202 aaKnown RBP23.66■■□□□ 1.38
VPS51-212ENST00000533656 CEP135Q66GS9 1140 aa23.66■■□□□ 1.38
VPS51-212ENST00000533656 CSGALNACT2Q8N6G5 542 aa23.66■■□□□ 1.38
VPS51-212ENST00000533656 FAM193BQ96PV7 902 aaPredicted RBP23.66■■□□□ 1.38
VPS51-212ENST00000533656 PPP1R10Q96QC0 940 aaKnown RBP23.66■■□□□ 1.38
VPS51-212ENST00000533656 GAS2L1Q99501 681 aaPredicted RBP23.66■■□□□ 1.38
VPS51-212ENST00000533656 SLC28A3Q9HAS3 691 aa23.66■■□□□ 1.38
VPS51-212ENST00000533656 COL4A4P53420 1690 aaPredicted RBP23.66■■□□□ 1.38
VPS51-212ENST00000533656 XIRP2A4UGR9 3374 aa23.66■■□□□ 1.38
VPS51-212ENST00000533656 SMIM28A0A1B0GU29 152 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 LACTBL1A8MY62 500 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 GNA14O95837 355 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 CYP24A1Q07973 514 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 PSMD6Q15008 389 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 LRRC55Q6ZSA7 311 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 INTS8Q75QN2 995 aaKnown RBP23.65■■□□□ 1.38
VPS51-212ENST00000533656 ZSWIM2Q8NEG5 633 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 PPM1EQ8WY54 764 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 CLP1Q92989 425 aaKnown RBP23.65■■□□□ 1.38
VPS51-212ENST00000533656 MFSD14AQ96MC6 490 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 SAMD11Q96NU1 681 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 DUSP9Q99956 384 aaKnown RBP23.65■■□□□ 1.38
VPS51-212ENST00000533656 TMEM175Q9BSA9 504 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 FUCA2Q9BTY2 467 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 AAASQ9NRG9 546 aa23.65■■□□□ 1.38
VPS51-212ENST00000533656 UBQLN1Q9UMX0 589 aaKnown RBP23.65■■□□□ 1.38
VPS51-212ENST00000533656 MUC3AQ02505 3323 aa23.64■■□□□ 1.38
VPS51-212ENST00000533656 MEFVO15553 781 aaPredicted RBP23.64■■□□□ 1.37
VPS51-212ENST00000533656 AKAP3O75969 853 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 ARHGEF15O94989 841 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 CAVIN2O95810 425 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 POMCP01189 267 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 LAG3P18627 525 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 CYP3A5P20815 502 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 STX17P56962 302 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 TUSC3Q13454 348 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 PPP2R2DQ66LE6 453 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 FILIP1Q7Z7B0 1213 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 FAM186BQ8IYM0 893 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 FAM212AQ96EL1 285 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 KIF12Q96FN5 646 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 FNBP1Q96RU3 617 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 MIOSQ9NXC5 875 aa23.64■■□□□ 1.37
VPS51-212ENST00000533656 CA3P07451 260 aa23.63■■□□□ 1.37
VPS51-212ENST00000533656 KRT13P13646 458 aa23.63■■□□□ 1.37
VPS51-212ENST00000533656 AFF1P51825 1210 aaKnown RBP23.63■■□□□ 1.37
VPS51-212ENST00000533656 DSC1Q08554 894 aa23.63■■□□□ 1.37
VPS51-212ENST00000533656 TMEM132DQ14C87 1099 aa23.63■■□□□ 1.37
VPS51-212ENST00000533656 TPD52L1Q16890 204 aaPredicted RBP23.63■■□□□ 1.37
VPS51-212ENST00000533656 RALGAPA2Q2PPJ7 1873 aa23.63■■□□□ 1.37
VPS51-212ENST00000533656 RDH13Q8NBN7 331 aa23.63■■□□□ 1.37
VPS51-212ENST00000533656 ENOX1Q8TC92 643 aaKnown RBP23.63■■□□□ 1.37
VPS51-212ENST00000533656 TMC2Q8TDI7 906 aa23.63■■□□□ 1.37
VPS51-212ENST00000533656 UROC1Q96N76 676 aa23.63■■□□□ 1.37
VPS51-212ENST00000533656 METTL14Q9HCE5 456 aaKnown RBP23.63■■□□□ 1.37
VPS51-212ENST00000533656 MRPL42Q9Y6G3 142 aaKnown RBP23.63■■□□□ 1.37
VPS51-212ENST00000533656 LCHNA4D1U4 455 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 LINC01553A4QN01 128 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 CASP4P49662 377 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 AP3M2P53677 418 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 ZBTB6Q15916 424 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 GLRA4Q5JXX5 417 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 SPOUT1Q5T280 376 aaKnown RBP23.62■■□□□ 1.37
VPS51-212ENST00000533656 JADE1Q6IE81 842 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 WDR49Q8IV35 697 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 BEST2Q8NFU1 509 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 CACTINQ8WUQ7 758 aaKnown RBP23.62■■□□□ 1.37
VPS51-212ENST00000533656 ZMAT2Q96NC0 199 aaKnown RBP23.62■■□□□ 1.37
VPS51-212ENST00000533656 BPIFA3Q9BQP9 254 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 DNAJC25Q9H1X3 360 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 CWH43Q9H720 699 aa23.62■■□□□ 1.37
VPS51-212ENST00000533656 FNDC1Q4ZHG4 1894 aaPredicted RBP23.62■■□□□ 1.37
VPS51-212ENST00000533656 PRRC2BQ5JSZ5 2229 aaKnown RBP23.61■■□□□ 1.37
VPS51-212ENST00000533656 MCCD1P59942 119 aaPredicted RBP23.61■■□□□ 1.37
VPS51-212ENST00000533656 NAB2Q15742 525 aa23.61■■□□□ 1.37
VPS51-212ENST00000533656 SPATA1Q5VX52 437 aa23.61■■□□□ 1.37
VPS51-212ENST00000533656 C11orf57Q6ZUT1 292 aaPredicted RBP23.61■■□□□ 1.37
VPS51-212ENST00000533656 FRMD5Q7Z6J6 570 aa23.61■■□□□ 1.37
VPS51-212ENST00000533656 COLGALT2Q8IYK4 626 aa23.61■■□□□ 1.37
VPS51-212ENST00000533656 DDX27Q96GQ7 796 aaKnown RBP23.61■■□□□ 1.37
VPS51-212ENST00000533656 TGS1Q96RS0 853 aaKnown RBP23.61■■□□□ 1.37
VPS51-212ENST00000533656 CGRRF1Q99675 332 aa23.61■■□□□ 1.37
VPS51-212ENST00000533656 SRRTQ9BXP5 876 aaKnown RBP23.61■■□□□ 1.37
VPS51-212ENST00000533656 NRDE2Q9H7Z3 1164 aa23.61■■□□□ 1.37
VPS51-212ENST00000533656 PDE11AQ9HCR9 933 aa23.61■■□□□ 1.37
VPS51-212ENST00000533656 PLAGL2Q9UPG8 496 aa23.61■■□□□ 1.37
VPS51-212ENST00000533656 ZC3H11AO75152 810 aaKnown RBP eCLIP23.6■■□□□ 1.37
VPS51-212ENST00000533656 IGFBP4P22692 258 aa23.6■■□□□ 1.37
VPS51-212ENST00000533656 RPL9P32969 192 aaKnown RBP23.6■■□□□ 1.37
VPS51-212ENST00000533656 PPM1AP35813 382 aa23.6■■□□□ 1.37
VPS51-212ENST00000533656 ALDH7A1P49419 539 aaKnown RBP23.6■■□□□ 1.37
VPS51-212ENST00000533656 BFSP1Q12934 665 aa23.6■■□□□ 1.37
VPS51-212ENST00000533656 CCDC85BQ15834 202 aaPredicted RBP23.6■■□□□ 1.37
VPS51-212ENST00000533656 ANO6Q4KMQ2 910 aa23.6■■□□□ 1.37
VPS51-212ENST00000533656 SPRED2Q7Z698 418 aa23.6■■□□□ 1.37
VPS51-212ENST00000533656 FAM114A1Q8IWE2 563 aa23.6■■□□□ 1.37
VPS51-212ENST00000533656 PARD3BQ8TEW8 1205 aa23.6■■□□□ 1.37
VPS51-212ENST00000533656 ANKRD36BP1Q96IX9 119 aa23.6■■□□□ 1.37
VPS51-212ENST00000533656 ZNF558Q96NG5 402 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms