RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ERVFC1P60507 584 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 SPAG1Q07617 926 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 HSP90AA2PQ14568 343 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-214ENST00000533209 ZNF658Q5TYW1 1059 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-214ENST00000533209 JADE1Q6IE81 842 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 BRSK2Q8IWQ3 736 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 CD302Q8IX05 232 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 GPD1LQ8N335 351 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 MICALL1Q8N3F8 863 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 TMEM130Q8N3G9 435 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 MAFAQ8NHW3 353 aaPredicted RBP13.03□□□□□ -0.32
SSBP3-214ENST00000533209 FAM212AQ96EL1 285 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 KIF12Q96FN5 646 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 FBXL18Q96ME1 805 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 COLEC11Q9BWP8 271 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 ASB7Q9H672 318 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 TLR9Q9NR96 1032 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 PUF60Q9UHX1 559 aaKnown RBP13.03□□□□□ -0.32
SSBP3-214ENST00000533209 MAN1B1Q9UKM7 699 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 PCDHGC5Q9Y5F6 944 aa13.03□□□□□ -0.32
SSBP3-214ENST00000533209 GOLGA6L22H0YM25 854 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 KIF20AO95235 890 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 KIF4AO95239 1232 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 IL18RAPO95256 599 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 NFICP08651 508 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 PRCPP42785 496 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 CYP2J2P51589 502 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 CLCNKBP51801 687 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 CAMK4Q16566 473 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 UPP1Q16831 310 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 TIGD5Q53EQ6 642 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 CD300LGQ6UXG3 332 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 TAS1R1Q7RTX1 841 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 CBWD2Q8IUF1 395 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 RNF168Q8IYW5 571 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-214ENST00000533209 VPS52Q8N1B4 723 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 C3orf58Q8NDZ4 430 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 GOLGA5Q8TBA6 731 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 NOC3LQ8WTT2 800 aaKnown RBP13.02□□□□□ -0.33
SSBP3-214ENST00000533209 TMEM174Q8WUU8 243 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 UROC1Q96N76 676 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 TSPAN18Q96SJ8 248 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.33
SSBP3-214ENST00000533209 ZBP1Q9H171 429 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 CLSTN2Q9H4D0 955 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 KIAA1586Q9HCI6 787 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 DMAC2Q9NW81 257 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 RBAKQ9NYW8 714 aaPredicted RBP13.02□□□□□ -0.33
SSBP3-214ENST00000533209 TUBGCP4Q9UGJ1 667 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 ADAM28Q9UKQ2 775 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 UBQLN1Q9UMX0 589 aaKnown RBP13.02□□□□□ -0.33
SSBP3-214ENST00000533209 TRAF3IP3Q9Y228 551 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 DERAQ9Y315 318 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 COL6A3P12111 3177 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 REV3LO60673 3130 aa13.02□□□□□ -0.33
SSBP3-214ENST00000533209 MYO7AQ13402 2215 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 EYSQ5T1H1 3165 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 ZNF233A6NK53 670 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 TMEM189-UBE2V1I3L0A0 370 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 PODXLO00592 558 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 CYP3A5P20815 502 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 BMP6P22004 513 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 LRPAP1P30533 357 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 RPL9P32969 192 aaKnown RBP13.01□□□□□ -0.33
SSBP3-214ENST00000533209 GUCY2FP51841 1108 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 MORC3Q14149 939 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 TMEM132DQ14C87 1099 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 CCDC85BQ15834 202 aaPredicted RBP13.01□□□□□ -0.33
SSBP3-214ENST00000533209 SNRNP35Q16560 246 aaKnown RBP13.01□□□□□ -0.33
SSBP3-214ENST00000533209 ZCWPW2Q504Y3 356 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 TCEAL5Q5H9L2 206 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 SPATA1Q5VX52 437 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 ISM2Q6H9L7 571 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 PDE12Q6L8Q7 609 aaKnown RBP13.01□□□□□ -0.33
SSBP3-214ENST00000533209 DCLRE1AQ6PJP8 1040 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 TMC7Q7Z402 723 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 ADGRD2Q7Z7M1 963 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 SLC9A9Q8IVB4 645 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 EFCAB13Q8IY85 973 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 ADSSL1Q8N142 457 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 MICAL1Q8TDZ2 1067 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 HASPINQ8TF76 798 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
SSBP3-214ENST00000533209 TCF25Q9BQ70 676 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 HERC2P3Q9BVR0 1158 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 GPR62Q9BZJ7 368 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 NSUN3Q9H649 340 aaKnown RBP13.01□□□□□ -0.33
SSBP3-214ENST00000533209 PDE11AQ9HCR9 933 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 KIAA1468Q9P260 1216 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 C2CD2Q9Y426 696 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 PLXNA4Q9HCM2 1894 aa13.01□□□□□ -0.33
SSBP3-214ENST00000533209 TDRD15B5MCY1 1934 aaKnown RBP13.01□□□□□ -0.33
SSBP3-214ENST00000533209 HIDE1A8MVS5 230 aa13□□□□□ -0.33
SSBP3-214ENST00000533209 BIN1O00499 593 aa13□□□□□ -0.33
SSBP3-214ENST00000533209 XPOTO43592 962 aaKnown RBP13□□□□□ -0.33
SSBP3-214ENST00000533209 TADA2AO75478 443 aa13□□□□□ -0.33
SSBP3-214ENST00000533209 NR3C1P04150 777 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms