RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 IER2Q9BTL4 223 aa12.74□□□□□ -0.37
CMTM1-216ENST00000533078 PDZD7Q9H5P4 517 aa12.74□□□□□ -0.37
CMTM1-216ENST00000533078 BRD9Q9H8M2 597 aa12.74□□□□□ -0.37
CMTM1-216ENST00000533078 ORC3Q9UBD5 711 aaPredicted RBP12.74□□□□□ -0.37
CMTM1-216ENST00000533078 MTRRQ9UBK8 725 aa12.74□□□□□ -0.37
CMTM1-216ENST00000533078 CDY1Q9Y6F8 540 aa12.74□□□□□ -0.37
CMTM1-216ENST00000533078 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
CMTM1-216ENST00000533078 PATJQ8NI35 1801 aa12.74□□□□□ -0.37
CMTM1-216ENST00000533078 GPR179Q6PRD1 2367 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 ARHGEF35A5YM69 484 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 TMEM189-UBE2V1I3L0A0 370 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 PRRG1O14668 218 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 PTGESO14684 152 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 ZNF197O14709 1029 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 RHOP08100 348 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 PTPN2P17706 415 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 YARSP54577 528 aaKnown RBP12.73□□□□□ -0.37
CMTM1-216ENST00000533078 ANKRD1Q15327 319 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 NOSTRINQ8IVI9 506 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 CLDN23Q96B33 292 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 ELSPBP1Q96BH3 223 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 MCRS1Q96EZ8 462 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 NACC1Q96RE7 527 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 RTKNQ9BST9 563 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 FZD8Q9H461 694 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 TUFT1Q9NNX1 390 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 GPRC5CQ9NQ84 441 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 HCFC1R1Q9NWW0 138 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 DNMT3BQ9UBC3 853 aaKnown RBP12.73□□□□□ -0.37
CMTM1-216ENST00000533078 GDAQ9Y2T3 454 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 MTF2Q9Y483 593 aaPredicted RBP12.73□□□□□ -0.37
CMTM1-216ENST00000533078 BACE2Q9Y5Z0 518 aa12.73□□□□□ -0.37
CMTM1-216ENST00000533078 EPG5Q9HCE0 2579 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 ACKR2O00590 384 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 ADAM12O43184 909 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 FGFR3P22607 806 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 TARSP26639 723 aaKnown RBP12.72□□□□□ -0.37
CMTM1-216ENST00000533078 NAMPTP43490 491 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 EFNA5P52803 228 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 ATXN1P54253 815 aaKnown RBP12.72□□□□□ -0.37
CMTM1-216ENST00000533078 NR5A1Q13285 461 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 CYP4A22Q5TCH4 519 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 PDZD4Q76G19 769 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-216ENST00000533078 IRF7Q92985 503 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 CNTNAP3BQ96NU0 1288 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 CNTNAP3Q9BZ76 1288 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 ZFP14Q9HCL3 533 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-216ENST00000533078 HEBP1Q9NRV9 189 aa12.72□□□□□ -0.37
CMTM1-216ENST00000533078 TOPORSQ9NS56 1045 aaPredicted RBP12.72□□□□□ -0.37
CMTM1-216ENST00000533078 NDRG2Q9UN36 371 aaKnown RBP12.72□□□□□ -0.37
CMTM1-216ENST00000533078 SPTBN2O15020 2390 aa12.71□□□□□ -0.37
CMTM1-216ENST00000533078 H7C4K7 107 aa12.71□□□□□ -0.37
CMTM1-216ENST00000533078 PFKFB2O60825 505 aa12.71□□□□□ -0.37
CMTM1-216ENST00000533078 CCR3P51677 355 aa12.71□□□□□ -0.37
CMTM1-216ENST00000533078 CLCNKBP51801 687 aa12.71□□□□□ -0.37
CMTM1-216ENST00000533078 DDX27Q96GQ7 796 aaKnown RBP12.71□□□□□ -0.37
CMTM1-216ENST00000533078 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
CMTM1-216ENST00000533078 TRMT61BQ9BVS5 477 aaKnown RBP12.71□□□□□ -0.37
CMTM1-216ENST00000533078 CCDC94Q9BW85 323 aaPredicted RBP12.71□□□□□ -0.37
CMTM1-216ENST00000533078 PRMT8Q9NR22 394 aaPredicted RBP12.71□□□□□ -0.37
CMTM1-216ENST00000533078 GJB4Q9NTQ9 266 aa12.71□□□□□ -0.37
CMTM1-216ENST00000533078 SLC38A7Q9NVC3 462 aa12.71□□□□□ -0.37
CMTM1-216ENST00000533078 ACACBO00763 2458 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 PHLPP2Q6ZVD8 1323 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 LILRB5O75023 590 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 TKTP29401 623 aaKnown RBP12.7□□□□□ -0.38
CMTM1-216ENST00000533078 ARPP19P56211 112 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 MTAPQ13126 283 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
CMTM1-216ENST00000533078 NAB2Q15742 525 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 EARS2Q5JPH6 523 aaKnown RBP12.7□□□□□ -0.38
CMTM1-216ENST00000533078 GLRA4Q5JXX5 417 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 ATF7IP2Q5U623 682 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 HAUS3Q68CZ6 603 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 LAIR1Q6GTX8 287 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 C1orf228Q6PIY5 440 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 TSSK4Q6SA08 328 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 PADI6Q6TGC4 694 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 PRR23BQ6ZRT6 265 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 CELF5Q8N6W0 485 aaKnown RBP12.7□□□□□ -0.38
CMTM1-216ENST00000533078 ZNF461Q8TAF7 563 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 CYP4F11Q9HBI6 524 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 NUB1Q9Y5A7 615 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 VWA8A3KMH1 1905 aa12.7□□□□□ -0.38
CMTM1-216ENST00000533078 A0A087WWV3 80 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 ARHGEF37A1IGU5 675 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 FAM205CA6NFA0 338 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 SYN3O14994 580 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 FOXD2O60548 495 aaPredicted RBP12.69□□□□□ -0.38
CMTM1-216ENST00000533078 LRP3O75074 770 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 MICAL2O94851 1124 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 CEBPBP17676 345 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 PSMC3P17980 439 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 ROR1Q01973 937 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 UPP1Q16831 310 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 TANGO2Q6ICL3 276 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 SLC8B1Q6J4K2 584 aa12.69□□□□□ -0.38
CMTM1-216ENST00000533078 CATSPER3Q86XQ3 398 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms