RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 KCNG4Q8TDN1 519 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 HDAC7Q8WUI4 952 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 DDX12PQ92771 950 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 HVCN1Q96D96 273 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 B3GALT6Q96L58 329 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 EPHX3Q9H6B9 360 aa18.18■□□□□ 0.5
PKP3-209ENST00000533069 TFIP11Q9UBB9 837 aaKnown RBP18.18■□□□□ 0.5
PKP3-209ENST00000533069 TDRD15B5MCY1 1934 aaKnown RBP18.17■□□□□ 0.5
PKP3-209ENST00000533069 TRAPPC3O43617 180 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 CUTAO60888 179 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 B3GAT3O94766 335 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 RTP2Q5QGT7 225 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 ATAT1Q5SQI0 421 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 FAM171A1Q5VUB5 890 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 FOXD4L5Q5VV16 416 aaPredicted RBP18.17■□□□□ 0.5
PKP3-209ENST00000533069 DYMQ7RTS9 669 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 RNF135Q8IUD6 432 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 C12orf76Q8N812 135 aaPredicted RBP18.17■□□□□ 0.5
PKP3-209ENST00000533069 CMASQ8NFW8 434 aaPredicted RBP18.17■□□□□ 0.5
PKP3-209ENST00000533069 FOXD4L4Q8WXT5 416 aaPredicted RBP18.17■□□□□ 0.5
PKP3-209ENST00000533069 PIK3R5Q8WYR1 880 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 RPGRIP1Q96KN7 1286 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 SCAND2PQ9GZW5 306 aaPredicted RBP18.17■□□□□ 0.5
PKP3-209ENST00000533069 PLEKHA5Q9HAU0 1116 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 NR2E1Q9Y466 385 aa18.17■□□□□ 0.5
PKP3-209ENST00000533069 MYMKA6NI61 221 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 NMT1P30419 496 aaKnown RBP18.16■□□□□ 0.5
PKP3-209ENST00000533069 RPL9P32969 192 aaKnown RBP18.16■□□□□ 0.5
PKP3-209ENST00000533069 SLC10A6Q3KNW5 377 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 HERC4Q5GLZ8 1057 aaPredicted RBP18.16■□□□□ 0.5
PKP3-209ENST00000533069 CYP26C1Q6V0L0 522 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 C15orf39Q6ZRI6 1047 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 SFR1Q86XK3 245 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 DNAJC19Q96DA6 116 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 ZMAT2Q96NC0 199 aaKnown RBP18.16■□□□□ 0.5
PKP3-209ENST00000533069 LRRC27Q9C0I9 530 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 HAPLN2Q9GZV7 340 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 CUEDC2Q9H467 287 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 PLEKHA4Q9H4M7 779 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 GOLGA2P5Q9HBQ8 144 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 MAN1C1Q9NR34 630 aa18.16■□□□□ 0.5
PKP3-209ENST00000533069 A0A087X0B3 334 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 A0A0B4J269 797 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 PODXLO00592 558 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 OGTO15294 1046 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 GPR37L1O60883 481 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 FGFR3P22607 806 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 PPP2R3AQ06190 1150 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 SOX4Q06945 474 aaPredicted RBP18.15■□□□□ 0.5
PKP3-209ENST00000533069 PSMD5Q16401 504 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 SEZ6Q53EL9 994 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 TMEM31Q5JXX7 168 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 SLFN12LQ6IEE8 588 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 TMC5Q6UXY8 1006 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 ZNF720Q7Z2F6 126 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 GPR149Q86SP6 731 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 CEP57Q86XR8 500 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 PDILTQ8N807 584 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 LNX1Q8TBB1 728 aaPredicted RBP18.15■□□□□ 0.5
PKP3-209ENST00000533069 TSPAN18Q96SJ8 248 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 MSTO1Q9BUK6 570 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 RHOBTB2Q9BYZ6 727 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 PANK2Q9BZ23 570 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 TNMDQ9H2S6 317 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 POMKQ9H5K3 350 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 OLFML3Q9NRN5 406 aa18.15■□□□□ 0.5
PKP3-209ENST00000533069 TTC26A0AVF1 554 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 FRMD3A2A2Y4 597 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 MEFVO15553 781 aaPredicted RBP18.14■□□□□ 0.49
PKP3-209ENST00000533069 TGM5O43548 720 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 FAM189A1O60320 539 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 CXCL8P10145 99 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 ALCAMQ13740 583 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 ZC2HC1CQ53FD0 456 aaPredicted RBP18.14■□□□□ 0.49
PKP3-209ENST00000533069 PRSS55Q6UWB4 352 aaPredicted RBP18.14■□□□□ 0.49
PKP3-209ENST00000533069 CD302Q8IX05 232 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 C3orf58Q8NDZ4 430 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 MRPL44Q9H9J2 332 aaKnown RBP18.14■□□□□ 0.49
PKP3-209ENST00000533069 CDH22Q9UJ99 828 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 EXOC7Q9UPT5 735 aa18.14■□□□□ 0.49
PKP3-209ENST00000533069 C5orf42Q9H799 3197 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 XPOTO43592 962 aaKnown RBP18.13■□□□□ 0.49
PKP3-209ENST00000533069 PPP1R37O75864 691 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 PAPLNO95428 1278 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 IDEP14735 1019 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 ME1P48163 572 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 E2F4Q16254 413 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 FOXD4L6Q3SYB3 417 aaPredicted RBP18.13■□□□□ 0.49
PKP3-209ENST00000533069 AXDND1Q5T1B0 1012 aaPredicted RBP18.13■□□□□ 0.49
PKP3-209ENST00000533069 SLC39A4Q6P5W5 647 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 LILRA6Q6PI73 481 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 SHC4Q6S5L8 630 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 CD300LGQ6UXG3 332 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 FOXD4L3Q6VB84 417 aaPredicted RBP18.13■□□□□ 0.49
PKP3-209ENST00000533069 PALB2Q86YC2 1186 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 IQUBQ8NA54 791 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 C18orf25Q96B23 403 aaPredicted RBP18.13■□□□□ 0.49
PKP3-209ENST00000533069 STRA6Q9BX79 667 aa18.13■□□□□ 0.49
PKP3-209ENST00000533069 RPF1Q9H9Y2 349 aaKnown RBP18.13■□□□□ 0.49
PKP3-209ENST00000533069 MAGEF1Q9HAY2 307 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms