RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 CC2D2BQ6DHV5 1058 aa9.99□□□□□ -0.81
BDNF-216ENST00000532997 SMIM5Q71RC9 77 aa9.99□□□□□ -0.81
BDNF-216ENST00000532997 PODNQ7Z5L7 613 aa9.99□□□□□ -0.81
BDNF-216ENST00000532997 NLRX1Q86UT6 975 aa9.99□□□□□ -0.81
BDNF-216ENST00000532997 C12orf50Q8NA57 414 aaPredicted RBP9.99□□□□□ -0.81
BDNF-216ENST00000532997 PYROXD1Q8WU10 500 aa9.99□□□□□ -0.81
BDNF-216ENST00000532997 NAF1Q96HR8 494 aaKnown RBP9.99□□□□□ -0.81
BDNF-216ENST00000532997 CSRNP1Q96S65 589 aa9.99□□□□□ -0.81
BDNF-216ENST00000532997 YIPF3Q9GZM5 350 aa9.99□□□□□ -0.81
BDNF-216ENST00000532997 RPTORQ8N122 1335 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 LIN7AO14910 233 aaPredicted RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 SLC16A4O15374 487 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 SPAG7O75391 227 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 ECM2O94769 699 aaPredicted RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 MTA2O94776 668 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 SLITRK3O94933 977 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 MT-ND3P03897 115 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 CYP1A2P05177 515 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 CYP11B1P15538 503 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 NOVP48745 357 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 JAK3P52333 1124 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 KCNJ2P63252 427 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 CCDC15Q0P6D6 951 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 BNIP1Q12981 228 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 CCNG2Q16589 344 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 CYP1B1Q16678 543 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 OTOP1Q7RTM1 612 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 LONP2Q86WA8 852 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 SCYL3Q8IZE3 742 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 PDCD7Q8N8D1 485 aaKnown RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 ATP11CQ8NB49 1132 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 INPP5DQ92835 1189 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 FAM212AQ96EL1 285 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 PSMC3IPQ9P2W1 217 aaPredicted RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 IP6K2Q9UHH9 426 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 PHTF1Q9UMS5 762 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 NR2E1Q9Y466 385 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 ZHX2Q9Y6X8 837 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 IGSF9BQ9UPX0 1349 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 IQANK1A0A1B0GTG1 560 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 FAM196BA6NMK8 535 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 MAP3K7O43318 606 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 ESRRAP11474 423 aaPredicted RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 MYCLP12524 364 aaPredicted RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 MARK3P27448 753 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 POLR2BP30876 1174 aaKnown RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 POU5F1Q01860 360 aaKnown RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 SNRNP35Q16560 246 aaKnown RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 WASHC2DQ5SRD0 308 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 MAK16Q9BXY0 300 aaKnown RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 VCX3BQ9H321 246 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 NINJ2Q9NZG7 142 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 ANKFY1Q9P2R3 1169 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 NAALADL1Q9UQQ1 740 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 PCDHB2Q9Y5E7 798 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 DOT1LQ8TEK3 1739 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 EML1O00423 815 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 FSCN2O14926 492 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 GYG2O15488 501 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 CCDC22O60826 627 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 UNC5CO95185 931 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 INHBAP08476 426 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 TM4SF1P30408 202 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 GTF2H1P32780 548 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 YWHAEP62258 255 aaKnown RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 P3H1Q32P28 736 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 RCOR2Q8IZ40 523 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 MAB21L3Q8N8X9 362 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 EPS8L1Q8TE68 723 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 SLC5A5Q92911 643 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 TRIM4Q9C037 500 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 DCLK3Q9C098 648 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 AVENQ9NQS1 362 aaPredicted RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 RPL26L1Q9UNX3 145 aaKnown RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 NEU2Q9Y3R4 380 aa9.98□□□□□ -0.81
BDNF-216ENST00000532997 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.98□□□□□ -0.81
BDNF-216ENST00000532997 H0Y3Z8 333 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 PAX7P23759 505 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 GPS1Q13098 491 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 ZYXQ15942 572 aaKnown RBP9.97□□□□□ -0.81
BDNF-216ENST00000532997 AADACL2Q6P093 401 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 DNAJC24Q6P3W2 148 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 ARHGEF19Q8IW93 802 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 PDIK1LQ8N165 341 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.97□□□□□ -0.81
BDNF-216ENST00000532997 DNAJC9Q8WXX5 260 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 ATP6V0A1Q93050 837 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 EBF2Q9HAK2 575 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 ZFATQ9P243 1243 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 VAV3Q9UKW4 847 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 STARD13Q9Y3M8 1113 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 SCN7AQ01118 1682 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 ZC3H11AO75152 810 aaKnown RBP eCLIP9.97□□□□□ -0.81
BDNF-216ENST00000532997 ABHD2P08910 425 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 MARCKSL1P49006 195 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 IRX4P78413 519 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 DNAJC3Q13217 504 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 PARP6Q2NL67 630 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 ANKRD20A2Q5SQ80 823 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms