RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 SLC15A5A6NIM6 579 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 SRGAP2O75044 1071 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 PALMO75781 387 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 B3GAT3O94766 335 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 ALS2CLQ60I27 953 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 SPOPLQ6IQ16 392 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 EPAS1Q99814 870 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TACO1Q9BSH4 297 aaKnown RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 PLEKHA5Q9HAU0 1116 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 IP6K2Q9UHH9 426 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TBKBP1A7MCY6 615 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 SULT1E1P49888 294 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 SNRPFP62306 86 aaKnown RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TROAPQ12815 778 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TMEM199Q8N511 208 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 ALKBH8Q96BT7 664 aaKnown RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 FAF2Q96CS3 445 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 CAPNS2Q96L46 248 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TARS2Q9BW92 718 aaKnown RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 DHX35Q9H5Z1 703 aaKnown RBP11.97□□□□□ -0.49
PTPRK-221ENST00000532331 TBK1Q9UHD2 729 aa11.97□□□□□ -0.49
PTPRK-221ENST00000532331 IQANK1A0A1B0GTG1 560 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 EXTL3O43909 919 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 CYP11B2P19099 503 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 SREBF1P36956 1147 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 HSD17B4P51659 736 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 DRP2Q13474 957 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 TTC23LQ6PF05 361 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 PARD6BQ9BYG5 372 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 ABI2Q9NYB9 513 aaPredicted RBP11.96□□□□□ -0.49
PTPRK-221ENST00000532331 SLCO1A2P46721 670 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 GRIK4Q16099 956 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 NFRKBQ6P4R8 1299 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 MOB2Q70IA6 237 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 NT5C1AQ9BXI3 368 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 TRIM9Q9C026 710 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 FBXO2Q9UK22 296 aaPredicted RBP11.96□□□□□ -0.49
PTPRK-221ENST00000532331 KRT7P08729 469 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 GNL1P36915 607 aaPredicted RBP11.96□□□□□ -0.49
PTPRK-221ENST00000532331 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.495e-7■■□□□ 12
PTPRK-221ENST00000532331 TAF2Q6P1X5 1199 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 DAGLBQ8NCG7 672 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 SYNDIG1Q9H7V2 258 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 KANSL3Q9P2N6 904 aa11.96□□□□□ -0.49
PTPRK-221ENST00000532331 PI4K2BG5E9Z4 385 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 ARP10275 920 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 SERPINB6P35237 376 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 CASP7P55210 303 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 TAP1Q03518 808 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 RCN2Q14257 317 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 PGM5Q15124 567 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 CD302Q8IX05 232 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 ALDH2P05091 517 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 PSEN2P49810 448 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 ZKSCAN8Q15776 578 aaPredicted RBP11.96□□□□□ -0.5
PTPRK-221ENST00000532331 GLE1Q53GS7 698 aaKnown RBP11.96□□□□□ -0.5
PTPRK-221ENST00000532331 KLC3Q6P597 504 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 DOLKQ9UPQ8 538 aa11.96□□□□□ -0.5
PTPRK-221ENST00000532331 TTC36A6NLP5 189 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 TOM1L1O75674 476 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 CCT5P48643 541 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 HARS2P49590 506 aaKnown RBP11.95□□□□□ -0.5
PTPRK-221ENST00000532331 RAB27AP51159 221 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 SLC7A5Q01650 507 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 C6orf118Q5T5N4 469 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 MOXD1Q6UVY6 613 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 CATSPERGQ6ZRH7 1159 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 ARHGAP18Q8N392 663 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 SLC7A5P2Q9GIP4 190 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 MROH1Q8NDA8 1641 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 DFFAO00273 331 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 CASP2P42575 452 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 NNTQ13423 1086 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 CDR2LQ86X02 465 aaPredicted RBP11.95□□□□□ -0.5
PTPRK-221ENST00000532331 CATSPER3Q86XQ3 398 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 MRPS31Q92665 395 aaKnown RBP11.95□□□□□ -0.5
PTPRK-221ENST00000532331 VPS39Q96JC1 886 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 SENP7Q9BQF6 1050 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 TINF2Q9BSI4 451 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 EGFRP00533 1210 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 ADCY2Q08462 1091 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 ELAVL2Q12926 359 aaKnown RBP11.95□□□□□ -0.5
PTPRK-221ENST00000532331 TMTC4Q5T4D3 741 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 RIOX2Q8IUF8 465 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 HPDLQ96IR7 371 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 APBA2Q99767 749 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 RSPH10B2B2RC85 870 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 RSPH10BP0C881 870 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 SSTR3P32745 418 aaPredicted RBP11.95□□□□□ -0.5
PTPRK-221ENST00000532331 NAMPTP43490 491 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 CCDC15Q0P6D6 951 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 IKBKEQ14164 716 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 GLRA4Q5JXX5 417 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 ZFPM1Q8IX07 1006 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 DNAJB3Q8WWF6 145 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 C7orf25Q9BPX7 421 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 AGO4Q9HCK5 861 aaKnown RBP11.95□□□□□ -0.5
PTPRK-221ENST00000532331 DPP3Q9NY33 737 aa11.95□□□□□ -0.5
PTPRK-221ENST00000532331 FAM198AQ9UFP1 575 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms