RNA–Protein interactions for RNA: ENST00000530680.1

SRPRA-204, Transcript of SRP receptor subunit alpha, humanhuman

TSL 4

Gene SRPRA, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-204ENST00000530680 CBWD2Q8IUF1 395 aa16.09■□□□□ 0.17
SRPRA-204ENST00000530680 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
SRPRA-204ENST00000530680 ZNF558Q96NG5 402 aa16.09■□□□□ 0.17
SRPRA-204ENST00000530680 RC3H2Q9HBD1 1191 aaKnown RBP16.09■□□□□ 0.17
SRPRA-204ENST00000530680 CNTN3Q9P232 1028 aa16.09■□□□□ 0.17
SRPRA-204ENST00000530680 YBX2Q9Y2T7 364 aaKnown RBP16.09■□□□□ 0.17
SRPRA-204ENST00000530680 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.09■□□□□ 0.17
SRPRA-204ENST00000530680 LINC01553A4QN01 128 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 LACTBL1A8MY62 500 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 PPP1R3GB7ZBB8 358 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 FAM189A1O60320 539 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 TMEM191BP0C7N4 346 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 DLATP10515 647 aaKnown RBP16.08■□□□□ 0.16
SRPRA-204ENST00000530680 OR1G1P47890 313 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 ALDH7A1P49419 539 aaKnown RBP16.08■□□□□ 0.16
SRPRA-204ENST00000530680 TFAMQ00059 246 aaKnown RBP16.08■□□□□ 0.16
SRPRA-204ENST00000530680 POU5F1Q01860 360 aaKnown RBP16.08■□□□□ 0.16
SRPRA-204ENST00000530680 TYRO3Q06418 890 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 SPAG1Q07617 926 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 ADGRE1Q14246 886 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 CCDC85BQ15834 202 aaPredicted RBP16.08■□□□□ 0.16
SRPRA-204ENST00000530680 NFIL3Q16649 462 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 SLC10A6Q3KNW5 377 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 ANKRD40Q6AI12 368 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 SLC9A9Q8IVB4 645 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 FAM186BQ8IYM0 893 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 CSGALNACT2Q8N6G5 542 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 BEST2Q8NFU1 509 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 SP7Q8TDD2 431 aaPredicted RBP16.08■□□□□ 0.16
SRPRA-204ENST00000530680 SAMD11Q96NU1 681 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 TGS1Q96RS0 853 aaKnown RBP16.08■□□□□ 0.16
SRPRA-204ENST00000530680 UHRF1Q96T88 793 aaPredicted RBP16.08■□□□□ 0.16
SRPRA-204ENST00000530680 ASB7Q9H672 318 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 RAPGEFL1Q9UHV5 662 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 RWDD2AQ9UIY3 292 aa16.08■□□□□ 0.16
SRPRA-204ENST00000530680 CHD7Q9P2D1 2997 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 CASTOR2A6NHX0 329 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 TNNC2P02585 160 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 TNNI1P19237 187 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 IGFBP4P22692 258 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 PPM1AP35813 382 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 PSMC2P35998 433 aaKnown RBP16.07■□□□□ 0.16
SRPRA-204ENST00000530680 CYP24A1Q07973 514 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 TUSC3Q13454 348 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 ZCWPW2Q504Y3 356 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 JADE1Q6IE81 842 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 ZSWIM2Q8NEG5 633 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 CACTINQ8WUQ7 758 aaKnown RBP16.07■□□□□ 0.16
SRPRA-204ENST00000530680 CCDC127Q96BQ5 260 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 ANKRD36BP1Q96IX9 119 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 TSPAN18Q96SJ8 248 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 UBQLN1Q9UMX0 589 aaKnown RBP16.07■□□□□ 0.16
SRPRA-204ENST00000530680 DERAQ9Y315 318 aa16.07■□□□□ 0.16
SRPRA-204ENST00000530680 TCF20Q9UGU0 1960 aaKnown RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 COL4A4P53420 1690 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 SMIM28A0A1B0GU29 152 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 TTC26A0AVF1 554 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 PTGESO14684 152 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 INPPL1O15357 1258 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 SLC16A3O15427 465 aaKnown RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 ADRB2P07550 413 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 NFICP08651 508 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 KCNE1P15382 129 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 AFF1P51825 1210 aaKnown RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 BCAR1P56945 870 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 ZSCAN23Q3MJ62 389 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 CT47A1Q5JQC4 288 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 CRELD2Q6UXH1 353 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 INTS8Q75QN2 995 aaKnown RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 NT5DC4Q86YG4 428 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 CREBRFQ8IUR6 639 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 COLGALT1Q8NBJ5 622 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 FBXO22Q8NEZ5 403 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 ARNTL2Q8WYA1 636 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 EEF2KMTQ96G04 330 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 TMEM169Q96HH4 297 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 CEP63Q96MT8 703 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 UROC1Q96N76 676 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 TMEM175Q9BSA9 504 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 GZF1Q9H116 711 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 CERS4Q9HA82 394 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 HCSTQ9UBK5 93 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 PRG3Q9Y2Y8 225 aaPredicted RBP16.06■□□□□ 0.16
SRPRA-204ENST00000530680 C2CD2Q9Y426 696 aa16.06■□□□□ 0.16
SRPRA-204ENST00000530680 ALDH2P05091 517 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 ERCC5P28715 1186 aaPredicted RBP16.05■□□□□ 0.16
SRPRA-204ENST00000530680 CASP4P49662 377 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 PMS1P54277 932 aaKnown RBP16.05■□□□□ 0.16
SRPRA-204ENST00000530680 TAP1Q03518 808 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 PSMD6Q15008 389 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 DCAF17Q5H9S7 520 aaPredicted RBP16.05■□□□□ 0.16
SRPRA-204ENST00000530680 TCERG1LQ5VWI1 586 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 TTI2Q6NXR4 508 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 KCNT2Q6UVM3 1135 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 ZNF280BQ86YH2 543 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 FAM114A1Q8IWE2 563 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 FBXL18Q96ME1 805 aa16.05■□□□□ 0.16
SRPRA-204ENST00000530680 PPP1R10Q96QC0 940 aaKnown RBP16.05■□□□□ 0.16
SRPRA-204ENST00000530680 CGRRF1Q99675 332 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms